Pairwise Alignments

Query, 780 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 658 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score =  269 bits (687), Expect = 4e-76
 Identities = 188/595 (31%), Positives = 296/595 (49%), Gaps = 32/595 (5%)

Query: 15  QLKFRAMRGQEGLSQLFEFEVDMVGTSFNIELKQLLGTSLTLELADDGGPRFLNGTVVRF 74
           + K     G E +SQ + F++++V    +++L+ LL   + L   D G  R ++G V R 
Sbjct: 20  EFKVFEFSGIESISQPYRFDIELVSEQPDLDLESLLHRQVYLGFDDRG--RGVHGLVYRM 77

Query: 75  ELVGRANETGRHYI-YRALVQPWLWYLTRTTDCRIFQNKSVPEVLDEVLGKYGFE---FE 130
                  ++GR    Y+  + P L YL  ++  RIFQ+K+VP+++ +VL   G +   FE
Sbjct: 78  A----QGDSGRRLTRYQMTLVPQLAYLGHSSHQRIFQHKTVPQIVAQVLEGQGIQRDRFE 133

Query: 131 KRLTASYRPWENCVQYQESDFAFVSRLMEHEGIAYHFEHGNGTHLLVLSDDTGGYSPLPG 190
            RL+ +Y   E CVQ+ E+D AF+ RL    GI YHF+H +  HLLV  DD   +  +  
Sbjct: 134 FRLSGTYPEREYCVQFGETDLAFIQRLCAELGIHYHFQHSSAGHLLVFGDDQTVF--VQA 191

Query: 191 HATIAYRPRDRVLNAMEPCIDQWRVSEQITSGRVMLDDFDFKKSRASLQSVQQDPKGHDH 250
                Y P   ++ A  P I ++ V  Q  +  V L D+DF+K   +L+S   +  G   
Sbjct: 192 DPPTPYTPGSGMV-ADTPVIKRFAVQVQARTTGVNLRDYDFRKPSLALES---EVTGEQL 247

Query: 251 STYEVYEWLGGYSEHQQGDAYAKIRLQELQCAHELARGHTNVVGMAPGYLFQMTHCPREA 310
              E   + G +++   G   A+  L+  +  + +ARG  +   +  G   ++   PRE 
Sbjct: 248 PPLEAQVYPGHFNDRAHGKYLAQRGLERHRSDYRVARGSGDEPALGSGRFLKLAGHPRED 307

Query: 311 DNREYLVTETRYDLQEPEYS-------SGGSSESVCEFDFTVLPSSVAYRPAR-NTPRPR 362
            N  +LVT   ++  +P+         +GG        +F+  P    +RP     PRP 
Sbjct: 308 WNDLWLVTHVTHEGLQPQVLEESVTEVAGGDFRQGYRNEFSATPWDAIFRPPMPEQPRPT 367

Query: 363 TNGPQTATVVGP--EEIWTDRFGRVKLQFRWDRYGQGDENSSCWVRVSSSWAGANFGTMH 420
             G Q A V GP   EI  D +GRVK+Q  WDR G+ +++SSCW+RV+S WA   +G++ 
Sbjct: 368 IAGYQNAVVTGPADSEIHCDEYGRVKVQLVWDRDGEHNDHSSCWLRVASGWAHDRYGSVL 427

Query: 421 MPRVGQEVIVDFIGGEPDRPIITGRVYNSDQMPPWELPANATASGILTRSSSGGAANQAN 480
           +PRVG EV+V F+ G+ D P++ G + N+    P +LPA+ T S   ++SS GG     N
Sbjct: 428 IPRVGMEVLVGFVNGDMDMPLVMGCLPNAATQVPLDLPADKTRSVFRSQSSPGGGG--YN 485

Query: 481 MLRFEDRTGSEQIWLHAERNLDVEVEADETHTTDGTRTTLIKGHESATYQDGETRDITAG 540
            LR EDR G+E+I+L A+R+    V  D     DG     ++G E          D+   
Sbjct: 486 ELRIEDRKGAEEIYLRAQRDWTQHVLHDLRVNVDGESHHELQGEELRITHGNRLTDLKQD 545

Query: 541 ARETITGGDTRDVTGGFTETVSGGVNQTISGGKTRMLSGGLQD--TITGGVNSAI 593
             + +  G +R V  G T  +  G +  I GG T  +  G Q      GG+ S++
Sbjct: 546 --DHLMVGGSRQVRAGQTIQIGAGQSVVIEGGATVTIQAGGQSITLCAGGIFSSV 598