Pairwise Alignments

Query, 67 a.a., DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) from Variovorax sp. SCN45

Subject, 87 a.a., DNA-directed RNA polymerase subunit omega from Pseudomonas putida KT2440

 Score = 62.8 bits (151), Expect = 6e-16
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)

Query: 1  MARITVEDCLTQIPNRFQLVLAATYRARMLSQ-GHAPKIESKN-KPAVTALREIAEGKIG 58
          MAR+TVEDCL  + NRF+LV+ +T RAR L+  G  P++  +N KP V ALREIAEG + 
Sbjct: 1  MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIVT 60

Query: 59 IEML 62
           E +
Sbjct: 61 NEFI 64