Pairwise Alignments

Query, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 366 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score =  216 bits (551), Expect = 7e-61
 Identities = 128/371 (34%), Positives = 196/371 (52%), Gaps = 12/371 (3%)

Query: 32  APTAAAPAAAPAPAPAGDTLVVKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIG 91
           A  A       APA   D   VK+G   P +G IA  G   + G + A+ D+NA G   G
Sbjct: 7   AALAVCAGLVLAPAAHAD---VKLGAAGPLTGSIAAFGTQMKTGVEQAVNDINAAG---G 60

Query: 92  DKTAKFELVAEDDAGDPKQGTAVAQKLVDEKVNGVVGHLNSGTTIPASKLYSDAGIPQIS 151
               K  L+  DD G P+QG A A KL+ +    V+GH+NSG +I AS  Y++AG+ QIS
Sbjct: 61  INGQKIVLLVADDGGKPEQGVAAANKLITDGATFVIGHVNSGISIAASSDYAEAGVLQIS 120

Query: 152 PSATNPKYTRQGFKTTFRVVADDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEF 211
           P++TNP YT +    TFR    D Q G   G +  E  K   IA++ D++ YG+G+A+E 
Sbjct: 121 PASTNPAYTERKLWNTFRTAGRDDQQGPVAGAFLAEKFKDGKIAIVHDKSPYGKGLADET 180

Query: 212 EKSAKAAGATIVGHEFTTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGL 271
           +K+   AG   V +E       D++A+++K+K+A  DV++FGG+    G +++Q++  GL
Sbjct: 181 QKALNKAGVKEVMYEGINPGEKDYSALVSKMKAAGVDVIYFGGLHPEAGLIVRQMRDQGL 240

Query: 272 NVKFMGGDGLCTGELPKLAGDAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQ 331
               MGGD L   E   +AG      ++      G D   K P      +  T  G++ +
Sbjct: 241 KTVLMGGDALADKEYWNIAGTGGTGTLMTF----GPD-PRKNPAAKGIVEAMTAKGIDAE 295

Query: 332 IYAPYVYDAVNVLAEAMVKAGSSDPEKYLPEV-GKVQYKGVTGPIAFDEKGDIKNGALTL 390
            Y  Y Y  V V+ +A   A S DP+K   ++   + ++ V GP++FD+KGDI      +
Sbjct: 296 GYVLYSYAGVQVIKQAAEAAKSLDPKKVAAQIHSGMTFQTVLGPLSFDKKGDITKPDFVV 355

Query: 391 YTYKGGARTQI 401
           Y +K GA +++
Sbjct: 356 YEWKDGAYSEL 366