Pairwise Alignments

Query, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score =  210 bits (535), Expect = 5e-59
 Identities = 125/360 (34%), Positives = 200/360 (55%), Gaps = 16/360 (4%)

Query: 47  AGDTLVVKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIGDKTAKFELVAEDDAG 106
           A DT  +KIG   P +GP+   G    +GAK AI+D+NA G   G      E    DDA 
Sbjct: 22  AADT--IKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAG---GVDGKMLEAKEYDDAC 76

Query: 107 DPKQGTAVAQKLVDEKVNGVVGHLNSGTTIPASKLYSDAGIPQISPSATNPKYTRQGFKT 166
           DPKQ  AVA K+V++ V  VVGHL S +T PAS +Y D G+  I+P+AT+P+ T +G+K 
Sbjct: 77  DPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPEITARGYKL 136

Query: 167 TFRVVADDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEFEKSAKAAGATIVGHE 226
            FR +  D+  G   G Y  + +K K +AV+ D+  YG+G+A   +++ ++ G  +   E
Sbjct: 137 IFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAVKQTLESKGTKVAVFE 196

Query: 227 FTTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGEL 286
                  DF++I+ KLK    D +++GG     G +L+Q ++ GL  KFMG +G+    +
Sbjct: 197 GLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGLKAKFMGPEGVGNDSI 256

Query: 287 PKLAGDAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQIYAPYV---YDAVNV 343
            ++A +A    +V   ++   D   K+ ++  KA  K  +G       P+V   Y AV +
Sbjct: 257 SQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSG-------PFVFPAYSAVEL 309

Query: 344 LAEAMVKAGSSDPEKYLPEVGKVQYKGVTGPIAFDEKGDIKNGALTLYTYK-GGARTQIA 402
           +A+ + KAGS D +K    + K  +K  TG ++FD+KGD+K+    +Y +  G  +T+++
Sbjct: 310 IAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYEWHFGKPKTEVS 369