Pairwise Alignments

Query, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

Subject, 322 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score =  269 bits (687), Expect = 8e-77
 Identities = 138/316 (43%), Positives = 202/316 (63%), Gaps = 6/316 (1%)

Query: 11  IAAIAACAPLLGWAA---WPDKPIRMVVPYAAGGGADNTARIVAQQLSAALGQQIVIDNR 67
           ++ +  C PL   A    +P K IR+VVP+  GG  D  AR+VA ++S   GQ +++DNR
Sbjct: 8   VSTLLVCLPLAAAAQASDFPSKAIRIVVPFPPGGATDAAARLVAVKMSEHWGQPVLVDNR 67

Query: 68  PGAGGVIGADNVAKAAADGYTVLYDAS-AFSVNPSL-RKLPFDAAKDFIPVSLVATAPQI 125
            GAGG +G+D VAK+ ADGYT++   + + ++N SL  K+P+D   DF+ +S VA  P +
Sbjct: 68  AGAGGNVGSDLVAKSPADGYTLVMGVTGSHAINASLYSKMPYDPVTDFVAISQVAVVPNV 127

Query: 126 LVVPENAPYKTVAEFLDFARKNPGKLSFASAGGGTGSHLAGEALNEQAKVNLMHVPYKGG 185
           LVV  + P K +AE +  A+K PGKL++AS G GT +HL  E L   A V++ HVPYKG 
Sbjct: 128 LVVHPSVPVKNLAELVALAKKEPGKLNYASLGNGTAAHLGMEMLKSDAGVDITHVPYKGS 187

Query: 186 APALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGESGLPGYN 245
           APA++DL+ GQV      + S L ++K+GKLRA+A++S +R P+LPD PT+ E+  PG+ 
Sbjct: 188 APAVSDLLAGQVQMMVDGLPSALPHIKAGKLRAIALTSLRRAPSLPDLPTISET-YPGFY 246

Query: 246 VVEWNGVFLPKGTPADIVQKLGKAVQAAINDPTVHQKLLQLGLEPAGTTPEAFARFVQDE 305
              W+G+F P+GTP  +V KL   VQ  +  P V +KL+ LG EP G+T   FA  V+ E
Sbjct: 247 ADAWSGLFAPRGTPQPVVDKLSAEVQRILKLPDVREKLVALGAEPVGSTQAEFAAHVKRE 306

Query: 306 IGRVSALVRARNIRVD 321
           I + + +V+    +VD
Sbjct: 307 IEKWAKVVKTSGAKVD 322