Pairwise Alignments

Query, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

Subject, 329 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  252 bits (644), Expect = 8e-72
 Identities = 132/323 (40%), Positives = 194/323 (60%), Gaps = 7/323 (2%)

Query: 5   RRVLKTIAAIAACAPLLGWAA----WPDKPIRMVVPYAAGGGADNTARIVAQQLSAALGQ 60
           RR +  +AA A    ++G  A    +PD+ I +VVP+AAGG  D  AR++AQ++   LGQ
Sbjct: 8   RRTVLKLAAAAVSFGMMGMTASAEGFPDRTITLVVPFAAGGSTDVVARVIAQKMGDELGQ 67

Query: 61  QIVIDNRPGAGGVIGADNVAKAAADGYTVLYDASA-FSVNPSLRKL-PFDAAKDFIPVSL 118
           QIV++N  GAGG +GAD VA+A  DGYT+L    A  ++NP + K  P+D  KDF PVSL
Sbjct: 68  QIVVENVAGAGGNLGADRVARAEPDGYTILMGTVATHALNPLILKTKPYDPQKDFAPVSL 127

Query: 119 VATAPQILVVPENAPYKTVAEFLDFARKNPGKLSFASAGGGTGSHLAGEALNEQAKVNLM 178
           +   P +LVV       +V E +   +  P K ++AS+G GT  HL+GE     A V++ 
Sbjct: 128 LVVVPNVLVVNPKLNVNSVEELIALLKAEPDKYAYASSGNGTPLHLSGELFKSMAGVSMQ 187

Query: 179 HVPYKGGAPALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGE 238
           HVPYKG  PAL DL+G Q+S  F N+ S+  ++KSG LRAL V++ +R  + PD PT+ E
Sbjct: 188 HVPYKGAGPALNDLLGNQISIMFDNLPSSSGHIKSGTLRALGVTTKERASSFPDLPTIAE 247

Query: 239 SGLPGYNVVEWNGVFLPKGTPADIVQKLGKAVQAAINDPTVHQKLLQLGLEPAGTTPEAF 298
           + +PGY    WN +F P GTPAD + KL  A + A+ D  V  ++ +   +   ++P+  
Sbjct: 248 T-VPGYETYTWNALFAPAGTPADAIDKLNAAAKKALADTGVAARMAEFSAKIVASSPDEL 306

Query: 299 ARFVQDEIGRVSALVRARNIRVD 321
              V  EI +   +V+  N+++D
Sbjct: 307 KDHVAAEIAKWEPVVKNANVQMD 329