Pairwise Alignments

Query, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 310 a.a., Transcriptional regulator PcaQ from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 2e-34
 Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 5/306 (1%)

Query: 8   LRSNLKLRHLQMLVALDQFRHLGRAAEFLAVTQPAVSKSLAEIERMFGLALFDRSTRGTE 67
           L + +K RHL   + + +   L RAA+ L+++QPA+SK+L E+E +    LF+RS +G E
Sbjct: 3   LDTRIKYRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFERSRQGVE 62

Query: 68  PTPYGDSVVRFARSVLADYDRTRDEIAAVA--SGAAGRTSVGAMVVAMPVLMARAVEMLK 125
            TP G    RF R         RD ++++   + A  +  +G +     +LM   +  L 
Sbjct: 63  LTPAG---TRFMRYAGPSVQALRDGVSSLRGEARAPSQVRIGVLSTVEGLLMPEVLCRLH 119

Query: 126 ARSSQTTVLVEEGDLTRLLPKLRLGELDLFVGRLEPGYAAPDLETEALHAEPMAVVLRPG 185
            R     + V  G   +LL +L LGEL+L VGR+        L  E L++E M++V+RPG
Sbjct: 120 QRHEALVISVVTGVSAQLLGQLHLGELELVVGRMTDSPQIQGLSFEHLYSESMSLVVRPG 179

Query: 186 HALLAKRRPGWTDLAKLPCVMPPPWASLRVKLDQMFFRDGVQPPVDIIESASFLAQMSFL 245
           H LLA        + + P V+PP   ++R   D +F + G+Q P   +E+ S      +L
Sbjct: 180 HPLLASTPVERGQVGRYPLVLPPAGTTIRQHADSLFVQCGIQMPAQRLETLSLALSRRYL 239

Query: 246 QQRDAAAFMARSVARHFQQQGVLKILPLKVPIELPPVGLITMRGERRTPSTEQLIECLRR 305
              D      R       ++G L  L L V      VG+        +   + + E LR 
Sbjct: 240 LGSDGLWVAPRDAVLLDLRRGELVELDLGVREPGGSVGICRNAALPLSLPGQWVGEVLRE 299

Query: 306 VAGSRR 311
           VAG  R
Sbjct: 300 VAGEYR 305