Pairwise Alignments

Query, 619 a.a., GGDEF domain protein from Variovorax sp. SCN45

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  111 bits (277), Expect = 1e-28
 Identities = 75/194 (38%), Positives = 101/194 (52%), Gaps = 11/194 (5%)

Query: 401 LVAELIVFAVAM-----GSRLQL-VLRSEQALTARTQQLVEALGTDALTGAASRAGFESR 454
           L+  L V AVA+      +RL+       ++LT   Q+L +    D LT   +R     R
Sbjct: 221 LITTLAVLAVALLTSVLDARLEARTAELARSLTLANQELTQLALHDTLTDLPNRTLLADR 280

Query: 455 GEEWL----HQGQPFALMLLDLDGFKGVNDAHGHAAGDQVLIAIAQRLRQQLRKDDVVAR 510
            E+ +     QG  FALM +DLDGFK VNDA GH  GD +L A+A RLR  L   D +AR
Sbjct: 281 IEQAIAKVAEQGGCFALMFIDLDGFKPVNDAFGHHIGDLLLKAVAARLRGHLHSQDTLAR 340

Query: 511 LGGDEFAVLVLGAPSREVLSLMARRMIEAGSQPVEYEGRSVTVGMSLGIACRPGDGDTLA 570
           +GGDEF +LV      + +  +A + +   S+P       + +  SLGI   PG+G    
Sbjct: 341 IGGDEFVLLVELQEPNDAMD-VAVKQVNLVSRPFRVAEHDLQLSASLGIVLYPGNGQDQH 399

Query: 571 RLLRAADRAMYHVK 584
            LLR AD AMYH K
Sbjct: 400 ELLRNADAAMYHAK 413



 Score = 25.4 bits (54), Expect = 0.009
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 403 AELIVFAVAMGSRLQLVLRSEQALTARTQQLVEALGTDALTG 444
           A ++   VA+G  L L + +E   T + Q  +  LG D+L G
Sbjct: 627 AAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQG 668