Pairwise Alignments

Query, 619 a.a., GGDEF domain protein from Variovorax sp. SCN45

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 2e-27
 Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 5/177 (2%)

Query: 433 LVEALGTDALTGAASRAGFESRGEEWLHQGQP----FALMLLDLDGFKGVNDAHGHAAGD 488
           L +A   DALT   +R GF     E L + Q      A+M LD+D FK +ND+ GH AGD
Sbjct: 286 LQQAAHYDALTNLLNRRGFNQVFAERLVEHQASENRLAVMFLDIDHFKRINDSLGHDAGD 345

Query: 489 QVLIAIAQRLRQQLRKDDVVARLGGDEFAVLVLGAPSREVLSLMARRMIEAGSQPVEYEG 548
           ++L  IA  ++   R  D+VAR GGDEF V V    SR+    +A+R+++    P++  G
Sbjct: 346 ELLKVIANHIKAATRNHDLVARFGGDEFCV-VTSLNSRDEARHLAQRIMQRMKDPIDLGG 404

Query: 549 RSVTVGMSLGIACRPGDGDTLARLLRAADRAMYHVKQHDAGPSFMFASDLAAAAAAA 605
           R + +  S+GI+  P DG T   LL+ AD A+Y  K +       F   L A A+ A
Sbjct: 405 RRMVMTTSIGISIFPDDGSTAEELLKHADLALYQSKDNGRNSLNFFNDSLKARASIA 461



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 404 ELIVFAVAMGSRLQLVLRSEQALTARTQQLVEALGTDALTG 444
           E++   +AM   L L + SE   TA  Q  +E+ G D L G
Sbjct: 656 EIVQAIIAMAHTLHLRVVSEGVETAEQQAFLESHGCDYLQG 696