Pairwise Alignments

Query, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

Subject, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

 Score =  369 bits (948), Expect = e-106
 Identities = 223/559 (39%), Positives = 326/559 (58%), Gaps = 18/559 (3%)

Query: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62
           L  +++ ++ IV  L+L+L  G +V+TGETGAGKSI++DAL L LG+RAD+G VR GA++
Sbjct: 2   LVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADK 61

Query: 63  LDVSAEFD-AD-PALATWLDEGGFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRELG 120
            D+ A FD AD P    WL E         +LRR +  +GRSRG+ING+P     L+ LG
Sbjct: 62  ADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKALG 121

Query: 121 DRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRTDA--LDAAWQGWRQALSALEHARSAQD 178
           + L+DIH QH  QSL + D  R LLD YAG    A  +  A Q WRQ    LE   ++ D
Sbjct: 122 ELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSGD 181

Query: 179 SLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQALEDEDNG- 237
             +   + L +Q+ E+  L  G  E E+L   H  ++NA+ L+   +   +   + D+G 
Sbjct: 182 EQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSGN 241

Query: 238 ALSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLRDAEADPQSLAEL 297
            L+AL+ +   L +             +L S   Q  +A   L+ +L   +ADP  L E+
Sbjct: 242 VLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQEI 301

Query: 298 DERMGLWMSLARRYKRTPAELPALLAGWQSELQALDAQSD-LDGLERAEQSAQQAYMKEA 356
           +ER+    +LAR+++  P E+  +      E++ L+A  + ++ L     S  + Y ++A
Sbjct: 302 EERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQEKA 361

Query: 357 KALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQPLA----QPGRAGLEEIAFLVAG 412
           + L   R+QAA  LA AV   +Q LGM GGRF ++L+  A    QP   GLE++  LV+ 
Sbjct: 362 RELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPH--GLEQVELLVSA 419

Query: 413 HTGSTPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGAVAETVGRLMK 472
           + G   +A+ KVASGGELSRI+LAI V T+Q     TL+FDEVD G+GG  AE VG+L++
Sbjct: 420 NPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLR 479

Query: 473 QLGRDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLDEDNRAKEIAR 532
           +LG   QVL VTHLPQVAA    HL V K + + A      T + VS+L++  R +E+AR
Sbjct: 480 RLGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDA------THTAVSKLNKSERVEEVAR 533

Query: 533 MLGGEKVSQTSLAHAREML 551
           MLGG  +++ SLAHA++M+
Sbjct: 534 MLGGIDLTKESLAHAKKMV 552