Pairwise Alignments

Query, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

Subject, 553 a.a., DNA repair protein RecN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  369 bits (946), Expect = e-106
 Identities = 223/556 (40%), Positives = 313/556 (56%), Gaps = 13/556 (2%)

Query: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62
           L ++ + +F IVR LE+D   G TV+TGETGAGKSI IDAL L LG RA+A  VR GA R
Sbjct: 2   LAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATR 61

Query: 63  LDVSAEFDAD--PALATWLDEGGFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRELG 120
            D+ A F     PA   WL+E   E G   LLRR +   GRSRG+ING+    +QLRELG
Sbjct: 62  ADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELG 121

Query: 121 DRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRTDA--LDAAWQGWRQALSALEHARSAQD 178
             L+ IHGQHA Q LT+P+  + LLD+YA     A  + A +Q W Q+   L H +    
Sbjct: 122 QLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQ 181

Query: 179 SLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQALED-EDNG 237
                 E LQ+Q+ E+    P A E+E++   + R++N+  L+  +Q A   L D ED  
Sbjct: 182 ERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVN 241

Query: 238 ALSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLRDAEADPQSLAEL 297
             S L  A  L+     ++ +   + ++L     Q ++A+  L  Y    + DP  L EL
Sbjct: 242 LQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFEL 301

Query: 298 DERMGLWMSLARRYKRTPAELPALLAGWQSELQALDAQSD-LDGLERAEQSAQQAYMKEA 356
           ++R+   +SLAR++  +P  LP L      E Q LD Q+D L+ L  A     Q  ++ A
Sbjct: 302 EQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETA 361

Query: 357 KALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQ-PLAQPGRAGLEEIAFLVAGHTG 415
           +AL + R+  A  L Q +TE+M  L M  G F +D++         G + + F V  + G
Sbjct: 362 QALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPG 421

Query: 416 STPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGAVAETVGRLMKQLG 475
              + I KVASGGELSRIALAI V T++      LIFDEVD G+ G  A  VG+L++QLG
Sbjct: 422 QPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLG 481

Query: 476 RDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLDEDNRAKEIARMLG 535
              QV+ VTHLPQVA C   H  V+K        +G  TE+ +  LD+  R +E+AR+LG
Sbjct: 482 ESTQVMCVTHLPQVAGCGHQHFFVSKE------TDGAMTETHMQPLDKRARLQELARLLG 535

Query: 536 GEKVSQTSLAHAREML 551
           G +V++ +LA+A+E+L
Sbjct: 536 GSEVTRNTLANAKELL 551