Pairwise Alignments

Query, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

Subject, 553 a.a., recombination and repair protein from Escherichia coli BL21

 Score =  368 bits (944), Expect = e-106
 Identities = 221/556 (39%), Positives = 314/556 (56%), Gaps = 13/556 (2%)

Query: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62
           L ++ + +F IVR LE+D   G TV+TGETGAGKSI IDAL L LG RA+A  VR GA R
Sbjct: 2   LAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAAR 61

Query: 63  LDVSAEFDAD--PALATWLDEGGFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRELG 120
            D+ A F     PA   WL+E   E G   LLRR +   GRSRG+ING+    +QLRELG
Sbjct: 62  ADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLRELG 121

Query: 121 DRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRT--DALDAAWQGWRQALSALEHARSAQD 178
             L+ IHGQHA Q LT+P+  + LLD YA   +    + A +Q W Q+   L H +    
Sbjct: 122 QLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLSQ 181

Query: 179 SLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQALED-EDNG 237
                 E LQ+Q+ E+ +  P   E+E++   + R++N+  L+  +Q A   + D ED  
Sbjct: 182 ERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDAN 241

Query: 238 ALSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLRDAEADPQSLAEL 297
             S L  A  L+     ++ +   + ++L     Q ++A+  L  Y    + DP  L EL
Sbjct: 242 LQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFEL 301

Query: 298 DERMGLWMSLARRYKRTPAELPALLAGWQSELQALDAQSDL-DGLERAEQSAQQAYMKEA 356
           ++R+   +SLAR++  +P  LP        E Q LD Q+D  + L  A     Q  ++ A
Sbjct: 302 EQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEIA 361

Query: 357 KALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQ-PLAQPGRAGLEEIAFLVAGHTG 415
           +AL + R+Q A  LAQ +T++M  L M  G+F +D++      G  G + I F V  + G
Sbjct: 362 RALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNPG 421

Query: 416 STPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGAVAETVGRLMKQLG 475
              + I KVASGGELSRIALAI V T++      LIFDEVD G+ G  A  VG+L++QLG
Sbjct: 422 QPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLG 481

Query: 476 RDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLDEDNRAKEIARMLG 535
              QV+ VTHLPQVA C   H  V+K        +G  TE+ +  LD+  R +E+AR+LG
Sbjct: 482 ESTQVMCVTHLPQVAGCGHQHYFVSKE------TDGAMTETHMQSLDKKARLQELARLLG 535

Query: 536 GEKVSQTSLAHAREML 551
           G +V++ +LA+A+E+L
Sbjct: 536 GSEVTRNTLANAKELL 551