Pairwise Alignments

Query, 617 a.a., FIG140336: TPR domain protein from Variovorax sp. SCN45

Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 75/366 (20%), Positives = 138/366 (37%), Gaps = 64/366 (17%)

Query: 284 PDLRIAYARVLVENRRFPDATAQLQALTAARPELAEPWLLLGS-------LQMQAKQDAA 336
           PD  +     L  +RR P+A A  +       ++ E    LG+       L+   +   +
Sbjct: 98  PDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQS 157

Query: 337 AEASLKRFIELSGNQSKDAGDVVDRRRSVSQAYFALSQLAERRKDFAAAERWLSRVTGTD 396
           A A    F+E   N +     V+ R    ++A   L +    R   A+ +  L R     
Sbjct: 158 ALALRPNFVEALANMA----GVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGR----- 208

Query: 397 EIVAAQTRRAALLARQGKLPQARELIRSLPERTADDKKQKFLAEVQLLRDAKQYQAAYDM 456
                     ALLA   ++     + R+L  R A D     +A   ++R   + + A + 
Sbjct: 209 ----------ALLASGHRIEADVAVCRAL--RLAPDSPPILVAAADVIRARGRMEEALEH 256

Query: 457 LAQASAAAPDDADLV----------------------------------YDQAMVAERLN 482
            A+A+  AP+    V                                  +D A     ++
Sbjct: 257 AARAAELAPNYPPAVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMS 316

Query: 483 RLDDMERLLRRLIELKPDNQNAYNALGYSLADRKIRLDEARTLIQKAVQLAPDDPFIADS 542
           RL +   L + L+  + D+   +N LG +L +    LD A    + A +L+PDDP +  +
Sbjct: 317 RLPEAVALYQALLAREHDHSEVWNNLGNALRELG-ELDRAAECYETAERLSPDDPVVMSN 375

Query: 543 LGWVEFRLGNTNEAIRILEAAYTTRPDPEIG-AHFGEVLWSSGQKDRAVTIWKESLLSDS 601
              +   LG   EA  +       +P   I  ++ G+ L++ G+ + A   +  +  +DS
Sbjct: 376 RAALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAGAADS 435

Query: 602 ENETLQ 607
            N+ ++
Sbjct: 436 TNDDIR 441



 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 77/335 (22%), Positives = 133/335 (39%), Gaps = 27/335 (8%)

Query: 291 ARVLVENRRFPDATAQLQALTAARPELAEPWLLLGSLQMQAKQDAAAEASLKRFIELSGN 350
           A VL    R  +A  +L+   A RP  A     LG   + +     A+ ++ R + L+ +
Sbjct: 173 AGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRIEADVAVCRALRLAPD 232

Query: 351 QSK---DAGDVVDRRRSVSQAYFALSQLAERRKDFAAAERWLSR---VTGTDEIVAAQTR 404
                  A DV+  R  + +A    ++ AE   ++  A   L+R     G  ++ A    
Sbjct: 233 SPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLMLARQLRAMGRRDLSAETYL 292

Query: 405 RAA---------------LLARQGKLPQARELIRSLPERTADDKKQKFLAEVQLLRDAKQ 449
           R A                L    +LP+A  L ++L  R   D  + +      LR+  +
Sbjct: 293 RLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLARE-HDHSEVWNNLGNALRELGE 351

Query: 450 YQAAYDMLAQASAAAPDDADLVYDQAMVAERLNRLDDMERLLRRLIELKPDNQNAYNALG 509
              A +    A   +PDD  ++ ++A +   L R+ + E L R+++ L+P      + LG
Sbjct: 352 LDRAAECYETAERLSPDDPVVMSNRAALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLG 411

Query: 510 YSLADRKIRLDEARTLIQKAVQLAPDDPFIADSLGWVEFRLGNTNEAIRILEAAYTTRPD 569
            +L  +  R++EAR     A      +  I      V   LG+  E   + EA +  R  
Sbjct: 412 QALYAQG-RMEEAREQFDAAGAADSTNDDIRFHRAIVRLMLGDFAEGWPLYEARWGNRKR 470

Query: 570 PEIGAHFGEVLWSSGQKD---RAVTIWKESLLSDS 601
            E   HF    W  G +D   + + +W E    D+
Sbjct: 471 AEPNRHFATPQW-LGDEDLAGKTLLLWSEQGFGDT 504



 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 3/195 (1%)

Query: 396 DEIVAAQTRRAALLARQGKLPQARELIRSLPERTADDKKQKFLAEVQLLRDAKQYQAAYD 455
           + I+A    +A  L + G+L +A E+ + +      D+    L  V   +   Q+  A  
Sbjct: 27  ETILAEDFAKAVELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMG-QFDLAIH 85

Query: 456 MLAQASAAAPDDADLVYDQAMVAERLNRLDDMERLLRRLIELKPDNQNAYNALGYSLADR 515
           ++ +A  A     D   +         RL + E   RR + L  D   A   LG +LA  
Sbjct: 86  LIGEAIRANDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQT 145

Query: 516 KIRLDEARTLIQKAVQLAPDDPFIADSLGWVEFRLGNTNEAIRILEAAYTTRP-DPEIGA 574
             RL+E+    Q A+ L P+      ++  V  RLG   EA+  L  A   RP +  + A
Sbjct: 146 G-RLEESLEFHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQA 204

Query: 575 HFGEVLWSSGQKDRA 589
             G  L +SG +  A
Sbjct: 205 DLGRALLASGHRIEA 219



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 61/193 (31%), Positives = 81/193 (41%), Gaps = 16/193 (8%)

Query: 152 ILIALNRISETTDLLRAEVAATSQVERP---LLMAVIARNYSRASDKKLAASVVEQALSD 208
           +L  L R +E  + LR  VA     ERP    L A + R    +  +  A   V +AL  
Sbjct: 175 VLSRLGRPAEAVEKLRRAVA-----ERPGEASLQADLGRALLASGHRIEADVAVCRALRL 229

Query: 209 ELKNPTTGALAWATVGRLRLNAGDASGALEAARRGQELDPS-SDAPAALALEMIDPGQ-P 266
              +P    +A A V R R   G    ALE A R  EL P+   A   LA ++   G+  
Sbjct: 230 APDSPPI-LVAAADVIRAR---GRMEEALEHAARAAELAPNYPPAVLMLARQLRAMGRRD 285

Query: 267 LAEPIVTRYLNNNPKATPDLRIAYARVLVENRRFPDATAQLQALTAARPELAEPWLLLG- 325
           L+     R           L  A A  L E  R P+A A  QAL A   + +E W  LG 
Sbjct: 286 LSAETYLRLAGIEGAGVAHLFDA-ANALNEMSRLPEAVALYQALLAREHDHSEVWNNLGN 344

Query: 326 SLQMQAKQDAAAE 338
           +L+   + D AAE
Sbjct: 345 ALRELGELDRAAE 357