Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  214 bits (545), Expect = 2e-60
 Identities = 119/292 (40%), Positives = 173/292 (59%), Gaps = 4/292 (1%)

Query: 1   MSSITAPSAAALKVPGFWRRALHHRSFVLG-GILTLLLLLAAAVSLVWTPWSPYDMDMAN 59
           M+++TAP  +  K    W+    +R   +G G+L +++L+A    L+  P+ P   ++A 
Sbjct: 1   MTTLTAPLVS--KPTTLWQALFQNRLSWIGIGLLVMIVLVALFAPLI-APYDPLQQNIAY 57

Query: 60  KLKPPMASHWLGTDTYGRDVASLLLVGARASILVGVIAVGIGLVVGTALGLLAAARRGWV 119
           +L+PP A  WLGTDTYGRDV S L+ G R S+LVG +AV I +VVG+ALG++A    G  
Sbjct: 58  RLEPPSAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGIT 117

Query: 120 EEAIMRLTDFSLAFPAILSAIMLTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSR 179
           +  I    D  L+FP +L  +M+ A+ GA + N I+AI I  I  F RI RA   A+  R
Sbjct: 118 DRLITGFVDVLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQR 177

Query: 180 EYVAAARACGKGSFAITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPS 239
           ++V A R+ G G   +   H+LPN+ + ++V   +  A AI  EA+LS++GLG  PP P+
Sbjct: 178 DFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPT 237

Query: 240 WGRMLSEAQTMMFQSPLLAVFPGMAIAFAVLGLNLLGDGLRDLLDPRLARAR 291
           WG M+ E    +  +  L VFP +AI   VL L+LLGD LRD  DP+    R
Sbjct: 238 WGSMIREGFENILDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTRSER 289