Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  186 bits (471), Expect = 7e-52
 Identities = 97/263 (36%), Positives = 147/263 (55%), Gaps = 8/263 (3%)

Query: 28  VLGGILTLLLLLAAAVSLVWTPW----SPYDMDMANKLKPPMASHWLGTDTYGRDVASLL 83
           V G ++ +L+LL     ++++PW     P  +D+  +L PP A+HW GTD  GRD+ S +
Sbjct: 34  VTGAVIIVLMLLM----MIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRV 89

Query: 84  LVGARASILVGVIAVGIGLVVGTALGLLAAARRGWVEEAIMRLTDFSLAFPAILSAIMLT 143
           LVG++ SIL G++ V I  ++G+ LG L+    G  +  IMR+ D  L+ P+++  + L 
Sbjct: 90  LVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALA 149

Query: 144 AVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSREYVAAARACGKGSFAITMQHVLPN 203
           A  G  + NA++AI I  IP + R+ R  A  +    YV AA+  G   + +   H+L N
Sbjct: 150 AALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRN 209

Query: 204 ISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTMMFQSPLLAVFPGM 263
               LIVQ ++    AIL  A L ++GLG Q P   WG M++  +  +        FPG 
Sbjct: 210 SLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGA 269

Query: 264 AIAFAVLGLNLLGDGLRDLLDPR 286
           AI    +G NL GDG+RDLLDP+
Sbjct: 270 AILLTAVGFNLFGDGIRDLLDPK 292