Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  205 bits (522), Expect = 9e-58
 Identities = 114/277 (41%), Positives = 161/277 (58%), Gaps = 10/277 (3%)

Query: 18  WRRALHHRSFVLGGILTLLLLLAAAVSLVWTPWSPYDMDMANK--LKPPMASHWLGTDTY 75
           WRR   +R  +LG ++ + LL  A  + V  P +P   D+ N   L P  A + LGTD  
Sbjct: 36  WRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDDQ 95

Query: 76  GRDVASLLLVGARASI----LVGVIAVGIGLVVGTALGLLAAARRGWVEEAIMRLTDFSL 131
           GRD+ S L+ G+R ++    LV +IA  IGL+VGT  G       GWV+  +MR+TD  L
Sbjct: 96  GRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAG----GWVDAILMRITDIFL 151

Query: 132 AFPAILSAIMLTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSREYVAAARACGKG 191
           AFP ++ A+ L A  G GI NA++AI + + P +ARI RA      + +++AA +  G  
Sbjct: 152 AFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGAS 211

Query: 192 SFAITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTMM 251
            F I ++HV+P   + LIV++T+  A  IL  A L +LGLG QPP P WG M++  +  +
Sbjct: 212 PFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFI 271

Query: 252 FQSPLLAVFPGMAIAFAVLGLNLLGDGLRDLLDPRLA 288
                +A  PG+AI    LG NLLGDGLRD LDP+ A
Sbjct: 272 LDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPKEA 308