Pairwise Alignments

Query, 329 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

 Score =  282 bits (722), Expect = 7e-81
 Identities = 161/321 (50%), Positives = 206/321 (64%), Gaps = 14/321 (4%)

Query: 1   MPLLQVKDLHIELQTQRGPAEAVR---GIDFTLERGETLGIVGESGCGKSITVMSLMGLL 57
           M LLQ+ +L++      G A AV    G+D  ++ GE L IVGESG GKS+T+M+LMGL+
Sbjct: 1   MSLLQINNLNVRF----GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLI 56

Query: 58  PSTAKVTG-SIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLR 116
            +  ++T  S+ FDGT+++    +   ++ G  I M+FQ+PMTALNP +T+  Q+ E LR
Sbjct: 57  DAPGRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLR 116

Query: 117 LHRGLSKADARKEVLALLERVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIA 176
            H GL    AR+  L LL++V IP A SRLDAYPHQ SGG  QR+ IAMA+A  P LLIA
Sbjct: 117 QHLGLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIA 176

Query: 177 DEPTTALDVTIQKQILELIQSLVAERGMALILISHDLGVIAQTVSKMLVMYGGSVVESGP 236
           DEPTTALDVTIQ QI+EL+ +L  ER MALILI+HDL V+A+T  ++ VMY G  VE G 
Sbjct: 177 DEPTTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQ 236

Query: 237 TEAVFARRAHPYTQGLFAARP--AIGAPRGLRLATIKGSVPELVDLPKGCPFAGRCSYTV 294
              +F   AHPY++ L AA P  +IGA    RLAT+ G VP   D P GC  + RC Y  
Sbjct: 237 VPELFDVPAHPYSEALLAAIPEHSIGAE---RLATLPGIVPGRYDRPVGCLLSPRCPYVQ 293

Query: 295 DACHTTRPPATMLPHDHAVRC 315
           D C   RPP     H   VRC
Sbjct: 294 DNCRRQRPPLDPQAHS-LVRC 313