Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  139 bits (349), Expect = 3e-37
 Identities = 143/520 (27%), Positives = 213/520 (40%), Gaps = 80/520 (15%)

Query: 7   LLATGAAALTPLALPTIALAQRKKDALVIGLTLEPTGLDPTAKAGAEIAEVVLYTVFETL 66
           LLA G  A  PLA        +    LV      P G DP+        +    TVF  L
Sbjct: 10  LLAAGLLACMPLA--------QAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRL 61

Query: 67  TKINSDGG-VTPLLAESWEVSPDLKTYTFKLRRGVKFQNGE------PFNAQSVKFSFDR 119
           T+    G  V P LA SW++S D  TYTF LR GVKF   +       FNA  V F+F+R
Sbjct: 62  TQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNR 121

Query: 120 AAAANSTNK-----DKRTFTNIATQV-------VDEHTVVLINKEIEPDLLFLLGQ---- 163
              A S  +     +   FT++           +D+HTV      ++   +  L      
Sbjct: 122 LLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFAS 181

Query: 164 ------ASAILVEPKSVETNATKPVGTGPYRLDNWAKGSSI-VLAKWDGWRGADTVQIRK 216
                 A+ +L + K+ E N  KPVGTGP+    + K S I  +A    W+  D V++  
Sbjct: 182 VQSAEYAAQLLKQGKAEEINQ-KPVGTGPFVFKRYQKDSQIRYVANKQYWKPED-VKLDN 239

Query: 217 ATFRFISEPAAQTAALLSNDIDLFPHASVSRSLSQFQNDKRFQIVFNASLGKTILAINNK 276
             F    + A++   L + +  +  +   +  +   + D    ++  A      LA N  
Sbjct: 240 LVFAITPDAASRLQKLKAGECQVSGYPRPA-DIEVMKQDPNLHVLQQAGFNLGFLAYNVT 298

Query: 277 RKPLDDVRVRRAISAAIDRKAVIDAAVDGRGVPIGSHYVPGLPGYVDTTGVNPYNIEKAK 336
             PLD ++VR+A+  AID+ A+I A     G    +   P    Y  T    PY+  KAK
Sbjct: 299 HPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAK 358

Query: 337 KLLAEAGVKTPLELEL-----VLPPPPYARQGGELIAAQLAKIGIVAKIQNVEWAQWI-- 389
            LL EAGV     + L          P AR   ++I     K+GI A I + EW ++I  
Sbjct: 359 ALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKR 418

Query: 390 -------------SGTYGNKNYDLSLILHVEPFDLVNYTKPEYYWGYQSARFNEAFDKAR 436
                        +G  G+ +  L ++         NY K    W       N A+DK  
Sbjct: 419 AKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAK----W------CNPAYDKLV 468

Query: 437 NAARPAD----RLRYLGDAQRLLAEDA-----ANVFLFQP 467
             A+ ++    R+++   AQ++L E       AN  +FQP
Sbjct: 469 QQAKVSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQP 508