Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 512 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  136 bits (342), Expect = 2e-36
 Identities = 130/507 (25%), Positives = 234/507 (46%), Gaps = 45/507 (8%)

Query: 4   RRTLLATGAAALTPLALPTIALAQRKKDALVIGLTLEPTGLDPTAKAGAEIAEVVLYTVF 63
           RR LLA    A    A P  A     KD +V+ +    T LDP   A   +++ V  + +
Sbjct: 7   RRWLLAASVTAALAAA-PAFAA----KD-VVVAVGSNFTTLDPY-DANDTLSQAVAKSFY 59

Query: 64  ETLTKINSDGGVTPLLAESWEVSPDLKTYTFKLRRGVKFQNGEPFNAQSVKFSFDRAAAA 123
           + L  ++ +  +  +LAE + VS D   YT KLR GVKFQ+G  FNA++VK + DRA+  
Sbjct: 60  QGLFGLDKEMKLKNVLAEGYTVSEDGLVYTIKLRTGVKFQDGTDFNAEAVKVNLDRASNP 119

Query: 124 NSTNKDKRTFTNIA-TQVVDEHTVVLINKEIEPDLLFLLGQASAILVEPKSVETNATK-- 180
            ++ K    + NIA T+VVD  TV +  KE     + +L   +  ++ P +++    +  
Sbjct: 120 ENSLKRYNLYKNIASTEVVDPATVKITLKEPFSAFINILAHPATAMISPAALKKYGKEIG 179

Query: 181 --PVGTGPYRLDNWAKGSSIVLAKWDGWRGADTVQIRKATFRFISEPAAQTAALLSNDID 238
             PVGTGPY L  W +   + + K+ G+      ++   T+R + +   + A L + +  
Sbjct: 180 FHPVGTGPYELLTWNQTDFVKVKKFAGYWQQGLPKLDTITWRPVVDNNTRAAMLQTGEAQ 239

Query: 239 LFPHASVSRSLSQFQNDKRFQIVFNASLGKTILAINNKRKPLDDVRVRRAISAAIDRKAV 298
            F         +  Q + + ++V + S+ +  +++N  +KP D+ +VR AI+ AI+R+A+
Sbjct: 240 -FAFPIPYEQAAILQKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQAL 298

Query: 299 IDAAVDGRGVPIGSHYVPGLPGYVDTTGVNPYNIEKAKKLLAEAGVKTPLELEL-VLPPP 357
           +  A  G   P  +  +P    Y  +    PY+  KA++LL EAG        L      
Sbjct: 299 VKVAFAGYATP-ATGVLPPAIAYAQSYQPWPYDPAKARELLKEAGFPNGFSTTLWSSHNH 357

Query: 358 PYARQGGELIAAQLAKIGIVAKIQNVEWAQ---------------------WISGTYGNK 396
             A++  +    QLA++GI  ++  ++  Q                     W + T G  
Sbjct: 358 STAQKVLQFTQQQLAQVGIKVQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWTAST-GEA 416

Query: 397 NYDLSLILHVE--PFDLVNYTKPEYYWGYQSARFNEAFDKARNAARPADRLRYLGDAQRL 454
           ++ LS +   +  P  L N         Y + + ++    A    +P +++R   DAQ +
Sbjct: 417 DWALSPLFASQNWPPTLFNTA------FYSNPQVDKDLADALKTTKPEEKVRLYKDAQDI 470

Query: 455 LAEDAANVFLFQPQFITIAGRNLRGLW 481
           + +++  V L   + ++   + L G +
Sbjct: 471 IWKESPWVPLVVEKLVSAHNKALTGFY 497