Pairwise Alignments

Query, 309 a.a., Protein QmcA (possibly involved in integral membrane quality control) from Variovorax sp. SCN45

Subject, 248 a.a., putative membrane protease family, stomatin from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 2e-32
 Identities = 68/195 (34%), Positives = 115/195 (58%), Gaps = 2/195 (1%)

Query: 1   MEFSVPLIILVIAIIFISQSVKFVPQQNAWVRERLGKYHGTMTPGPNFLIPFIDRVAYKH 60
           M+     +++V+A++ +S + + + +    V  +LG++     PG   LIP I ++  + 
Sbjct: 1   MQVGFGAVLIVLAMLVLS-AFRILREYERGVVFQLGRFWQVKGPGLILLIPVIQQMV-RV 58

Query: 61  SLKEIPLDVPSQICITRDNTQLQVDGILYFQVTDPMRASYGSSNYIVAVTQLAQTSLRSV 120
            L+ + LDVP Q  ITRDN  ++V+ +LYF+V DP +A     +++VA +QLAQT+LR+V
Sbjct: 59  DLRTVVLDVPPQDVITRDNVSVKVNAVLYFRVLDPQKAIIQVEDFLVATSQLAQTTLRAV 118

Query: 121 IGKLELDKTFEERDVINAQVVAAIDEAALNWGVKVLRYEIKDLTPPKEILLAMQAQITAE 180
           +GK ELD+   ER+ +N  +   +D     WG+KV   EIK +   + ++ A+  Q  AE
Sbjct: 119 LGKHELDELLAEREQLNLDIRQVLDAQTDAWGIKVANVEIKHVDLNESMVRAIARQAEAE 178

Query: 181 RGKRALIAASEGRRQ 195
           R +RA +  +EG  Q
Sbjct: 179 RERRAKVIHAEGELQ 193