Pairwise Alignments

Query, 213 a.a., no description from Variovorax sp. SCN45

Subject, 200 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 86.3 bits (212), Expect = 4e-22
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 17/197 (8%)

Query: 3   LVERVQSILLKPKATWPVIDAEPADPAS-LYKNYVMILALIPAVAGFIGLSLIGIGAFGI 61
           ++  V  +   P   W  I  +  +    +Y  + +ILA IPAV+ FIG + +G   + I
Sbjct: 1   MIHHVVGLFTHPDQEWREIRGDKEESIGHMYLTHTLILAAIPAVSAFIGTTQVG---WVI 57

Query: 62  SFRVPIV----SGLAHMVVGYVLSLVMVFVLALIIDAMAPTFEGTKSQIGALKLSAYAST 117
             R P++    S L   ++ Y   L  V V+   +  MA T++   S    +  + Y +T
Sbjct: 58  GNRAPVMLTQESALWMTLMSYAAMLGGVAVMGAFVHWMARTYDANPSMARCVAFATYTAT 117

Query: 118 AAFVGGIFSLLPSL---SIIGALAALYGIYLLYTGLPVLMRCPPDKAVAYTA------VV 168
             F+GG+ +L P +    ++G  A  Y +YLLY GLP  M   PD+   +++      +V
Sbjct: 118 PLFIGGLAALYPHMWLGMVVGTAAICYTVYLLYVGLPTFMNIDPDEGFLFSSSVLAVGLV 177

Query: 169 VVCAIVGGCIIGWVLAL 185
           V+ AI+   ++ W L +
Sbjct: 178 VLVAIMAFTVVVWGLGV 194