Pairwise Alignments

Query, 563 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

Subject, 547 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  462 bits (1188), Expect = e-134
 Identities = 270/517 (52%), Positives = 350/517 (67%), Gaps = 3/517 (0%)

Query: 1   VKNLKISARLSLVFGLLLLLLAAIAFVGINRLHYLDATT-TRITSNISPKIEAAREMSYQ 59
           + N+ I  RL++V GL+L L  A +   + +L  L     T I  N+  +   A  + + 
Sbjct: 3   LSNVSIGKRLAIVLGLILALFLATSVAAVFKLRQLSVEIDTMIEDNVKTERAGADWLRHT 62

Query: 60  AADVTRMTRNLILVKDEAVRTTNRQTLEQSRAETDRQMAILDKLVDNDRSRELLAALKTR 119
            A V R            +      T    +   + Q  I  KLV  +  ++LL  + T 
Sbjct: 63  TAGVQRAAAIAKSSDSSLIDYFAPATAASIKDTNELQKFIEGKLVKPEE-KQLLEKVATL 121

Query: 120 LADYRSFTNAVADLAMANRPEEATQMLFGERNKTQAAYLGALREMVEFTSEQMNKAADAA 179
              Y +    V+   ++     A ++   +   T  +Y+  ++++V    EQ++ AA  A
Sbjct: 122 RKGYLASREEVSKAKVSGDLAGANRLFDSQFQPTSTSYIAGVQQVVNLQREQLDAAAARA 181

Query: 180 SSAAETAIDIMVATAVLAVVLGVVSAWLITRSITHPLNRAVAVADRVAQGDL-GEPIEVQ 238
           ++       +++  + +++VLG + AW + RSIT PL+ A  +A  +A  DL G+P    
Sbjct: 182 NNLRAQTSTLLIVCSTVSLVLGALLAWFLARSITRPLHNAETIAQAIADMDLTGKPQHSY 241

Query: 239 STDETGRMLTALQRMQESLARTVGQVRGNAEGVASASAQISQGNEDLSSRTEEQASSLEQ 298
           + DETG +L AL  M+ +L  ++ QV G    V++AS QI+ GN+DLSSRTEEQASSLE+
Sbjct: 242 ANDETGHLLRALDLMRTALQGSLTQVHGVVMNVSTASTQIATGNQDLSSRTEEQASSLEE 301

Query: 299 TAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGAVVGKVVETMASIDASSRKIVEI 358
           TAAS+EELTSTVKQNADNARQANQLA SASEVAV+GG+VV +VVETM SI+ASS+KIV+I
Sbjct: 302 TAASIEELTSTVKQNADNARQANQLATSASEVAVRGGSVVFQVVETMGSINASSKKIVDI 361

Query: 359 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAAAAKEIKDLIGDS 418
           I VIDGIAFQTNILALNAAVEAARAG+QGRGFAVVA EVRNLAQRSAAAAKEIK LIG+S
Sbjct: 362 ISVIDGIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRNLAQRSAAAAKEIKTLIGNS 421

Query: 419 VGKVDAGTALVSEAGRTMDDIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVT 478
           V KV+ G+  V++AGRTMD+IVGSV+RVTDIMGEI+AASQEQTSGIEQINQAITQMDQ T
Sbjct: 422 VEKVEEGSRQVADAGRTMDEIVGSVKRVTDIMGEISAASQEQTSGIEQINQAITQMDQAT 481

Query: 479 QQNAALVEEAAAAAASLRDQAGNLLQAVSVFKLEDGH 515
           QQNAALVEEA+AAA SL++QAG+L Q V  FKLE GH
Sbjct: 482 QQNAALVEEASAAAQSLQEQAGSLAQIVGQFKLEHGH 518