Pairwise Alignments

Query, 563 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

Subject, 541 a.a., chemotaxis protein from Dickeya dianthicola ME23

 Score =  392 bits (1006), Expect = e-113
 Identities = 226/519 (43%), Positives = 321/519 (61%), Gaps = 5/519 (0%)

Query: 2   KNLKISARLSLVFGLLLLLLAAIAFVGINRLHYLDATTTRITSNISPKIEAAREMSYQAA 61
           K +K+ + L + F +++ +   +A  G ++L  L      ++      +   +E      
Sbjct: 5   KEMKLGSMLGVGFTMVIAIGFLVAIYGQSQLRQLSTNIQTLSKERITNLLLIQEYKDNLN 64

Query: 62  DVTRMTRNLILVKDEAVRTTNRQTLEQSRAETDRQMAILDKLVDNDRSRELLAALKTRLA 121
              R+ RN+ L+ D    T  +Q ++      D  +A L K+      + L+A L     
Sbjct: 65  IAARVIRNIALLSDHQQMTEEKQRIDNMAPRNDDIIATLHKVAVTPEQKALMAQLDQNRP 124

Query: 122 DYRSFTNAVADLAMANRPEEATQMLFGERNKTQAAYLGALREMVEFTSEQMNKAADAASS 181
            Y+       D  + N+ +EA  ++  +  ++Q A   A+  M+ +        AD + S
Sbjct: 125 AYQDAVRKAIDKGLENKDDEARDLILNDVRRSQDALFKAIDTMLTYQKSATTATADDSES 184

Query: 182 AAETAIDIMVATAVLAVVLGVVSAWLITRSITHPLNR----AVAVADRVAQGDLGEPIEV 237
            A  A  +M++ A L  V G + AWLITR I   L      A  +A +VAQGDL   + +
Sbjct: 185 QANGAGILMLSLAALIAVAGSLIAWLITRFIKGQLGGEPTYASHIAQQVAQGDLSVDVLL 244

Query: 238 QSTDETGRMLTALQRMQESLARTVGQVRGNAEGVASASAQISQGNEDLSSRTEEQASSLE 297
           ++ D    +L A++ M++SL+  V QVR ++E +A+ S QI+ GN DLS RTEEQA+SL+
Sbjct: 245 KTGDRHS-LLAAMRTMRDSLSHIVNQVRQSSESIATGSQQIAMGNADLSQRTEEQAASLQ 303

Query: 298 QTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGAVVGKVVETMASIDASSRKIVE 357
           QTAASME+++ T++QN +  R+A Q+A +AS+ A KG  VVG V++TMA I ASSRKI +
Sbjct: 304 QTAASMEQISQTIRQNGETVREAAQIATTASDTAAKGSEVVGNVIQTMAEITASSRKIGD 363

Query: 358 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAAAAKEIKDLIGD 417
           II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR+LAQRSA AA+EIK+LI +
Sbjct: 364 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAYAAREIKELITE 423

Query: 418 SVGKVDAGTALVSEAGRTMDDIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQV 477
           S+ KV+ G+ LV  AG TMDDIV   R V D++ EI   + EQ SGI QIN A+ Q+DQV
Sbjct: 424 SMEKVENGSQLVGHAGTTMDDIVTQARHVADLIKEIGVTTTEQESGISQINLAVNQLDQV 483

Query: 478 TQQNAALVEEAAAAAASLRDQAGNLLQAVSVFKLEDGHQ 516
           TQQNAALVE++A+AA SL DQA +L+Q ++VF +   H+
Sbjct: 484 TQQNAALVEQSASAADSLSDQARHLVQLMNVFVVAGNHR 522