Pairwise Alignments

Query, 411 a.a., Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA from Variovorax sp. SCN45

Subject, 359 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 4e-61
 Identities = 145/354 (40%), Positives = 182/354 (51%), Gaps = 27/354 (7%)

Query: 41  ARRLHALTVLTLFLTFDLTLFGAFTRLTDSGLGCPDWPGCYGNASPHGARHEIAMAQSAQ 100
           AR    L V    L   + L GA+TRLT +GLGCPDWPGCYG  S      ++A A+   
Sbjct: 2   ARPGFRLAVFATLLALLVVLLGAYTRLTHAGLGCPDWPGCYGFISVPKTDVQLAHAELHF 61

Query: 101 PTGPVTHGKAWVEMVHRYLATGVGVLILTLAGATWIVRRRQRRVPQPSSSSKDGDHHATL 160
           P  PV   K W EMVHRY A  + V+I  LA   +   RR  R  QP             
Sbjct: 62  PEHPVEAAKGWAEMVHRYFAGSLAVVIALLA---FQAMRRHARDGQPYRL---------- 108

Query: 161 SAWWPAFTLVWVCLQGAFGALTVTWKLFPAIVTLHLLGAVVLLALLCIQAVHYRQAAAQR 220
               P   L  V  Q AFG  TVT KL+P +VT HLLG    L+LL + ++   +A A  
Sbjct: 109 ----PMLLLGVVLAQAAFGMWTVTLKLWPQVVTAHLLGGFTTLSLLFLLSLRLSRAFA-- 162

Query: 221 LPTALSPALRNGLIATTVLLVL-QIALGGWVSTNYAVLACTQFPTCQDSWWPPMNFAQGF 279
            P    P     + A  +L+V+ QIALGGWVS NYA +AC   PTC   WWP  +F+ GF
Sbjct: 163 -PLPKLPLSLRRIAALALLVVIGQIALGGWVSANYAAVACIDLPTCHGQWWPAADFSNGF 221

Query: 280 EIWRHLGVTGEGQPLDFSALTAIHYAHRLMAYAVFAALGVLAWRLRRIDTLKPQARWLAG 339
            + +H+G    G  LD  A TAIH +HRL A  V   L +L+W+L R     P    L  
Sbjct: 222 HLTQHVGPNYLGGQLDSDARTAIHISHRLGALLVTCVLLMLSWKLHRCGL--PGLSRLVL 279

Query: 340 LAL-LQLATGLGNVLLGWPLAAAVLHTGGAAALAVVLTWALCESR-RAVPEARL 391
           LAL LQ+  G+ NV+   PLA AV H  G A L  +L+  L   R R V + R+
Sbjct: 280 LALALQVGLGISNVVFHLPLAVAVAHNAGGAML--LLSMVLVNYRIRVVDKVRV 331