Pairwise Alignments

Query, 293 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 295 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  282 bits (722), Expect = 6e-81
 Identities = 144/292 (49%), Positives = 180/292 (61%), Gaps = 13/292 (4%)

Query: 12  YFVPGPSAYPVSAAIGLFFVILGAAQWIN------GHAWGAWSLLAGMVIWLGTLFVWFR 65
           Y+VP  S +P+ A  GL   + G   W N        + G W    G ++    LF WF 
Sbjct: 7   YYVPAQSKWPIIATFGLLITVYGLGLWFNDLKAARAESHGPWIFFVGGLLLAYMLFGWFG 66

Query: 66  AAIGESESGQYGHKVDLSFRWSMSWFIFSEVMFFGAFFTALWWARTHALPTLGSLDNA-- 123
           A I ES +G Y  ++D SFRW M+WFIFSEVMFF AFF AL++ R  + P LG   +   
Sbjct: 67  AVIKESRAGLYSSQMDRSFRWGMTWFIFSEVMFFIAFFGALFYVRHMSGPWLGGEGHKGI 126

Query: 124 --ILWPDFKAVWPSVAAGATGSPAGIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHHAL 181
             +LWP+F+  WP +       P     P  T+ P+ LP +NT LL+SS VT+TIAHHAL
Sbjct: 127 AHMLWPNFEFAWPLLN---NPDPKMYPAPEGTISPWGLPLVNTILLVSSSVTITIAHHAL 183

Query: 182 RAGHRAQTIRFMWMTVLLGLIFLGVQAYEYHHLYTELNLKLSSGTYGSTFFMLTGFHGLH 241
           R GHR     ++ +TVLLGL FLG QA EY H Y EL L L SG YG+TFFMLTGFHG H
Sbjct: 184 RKGHRGALKIWLAITVLLGLAFLGFQAEEYIHAYKELGLTLGSGVYGATFFMLTGFHGAH 243

Query: 242 VFIGMLMLLFITLRLRKGHFTPERHFGFEGAAWYWHFVDVVWLGLYMLVYWL 293
           V IG ++L  + +R+ KGHF  E  FGFE A+WYWHFVDVVW+GL+  VY L
Sbjct: 244 VTIGTVILFVMLMRILKGHFNAEHQFGFEAASWYWHFVDVVWIGLFFFVYVL 295