Pairwise Alignments

Query, 293 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 204 a.a., cytochrome o ubiquinol oxidase subunit III (NCBI) from Escherichia coli BW25113

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 6/172 (3%)

Query: 120 LDNAILWPDFKAVWPSVAAGATGSPAGIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHH 179
           + + IL+    A +  +  G  G P G  + F+   PF L  + T LLL S +T  +A  
Sbjct: 34  MSDCILFSILFATYAVLVNGTAGGPTG-KDIFEL--PFVL--VETFLLLFSSITYGMAAI 88

Query: 180 ALRAGHRAQTIRFMWMTVLLGLIFLGVQAYEYHHLYTELNLKLSSGTYGSTFFMLTGFHG 239
           A+   +++Q I ++ +T L G  F+G++ YE+HHL         SG + S FF L G HG
Sbjct: 89  AMYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSG-FLSAFFALVGTHG 147

Query: 240 LHVFIGMLMLLFITLRLRKGHFTPERHFGFEGAAWYWHFVDVVWLGLYMLVY 291
           LHV  G++ +  + +++ +   T          + +WHF+DVVW+ ++ +VY
Sbjct: 148 LHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVY 199