Pairwise Alignments

Query, 293 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 297 a.a., Cytochrome c oxidase subunit 3 from Alteromonas macleodii MIT1002

 Score =  260 bits (665), Expect = 2e-74
 Identities = 134/292 (45%), Positives = 181/292 (61%), Gaps = 17/292 (5%)

Query: 12  YFVPGPSAYPVSAAIGLFFVILGAAQWI-----NGHAWGAWSLLAGMVIWLGTLFVWFRA 66
           Y+VP  S +P+  A+ LF + +GA  ++         +G   LLAG+ + L  L  WF+ 
Sbjct: 13  YYVPAQSPWPIVGAVALFLIAVGAGNYVVQATKGETGYGGHILLAGIAVLLVMLVGWFKN 72

Query: 67  AIGESESGQYGHKVDLSFRWSMSWFIFSEVMFFGAFFTALWWARTHALPTLG-----SLD 121
            I ES +G Y  ++  S+R  MSWFIFSEVMFF AFF AL++AR  ++P LG     ++ 
Sbjct: 73  QIDESMAGLYSDQLGRSYRQGMSWFIFSEVMFFAAFFGALYYARFISVPWLGGASNNAMT 132

Query: 122 NAILWPDFKAVWPSVAAGATGSPAGIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHHAL 181
           N +LWP F+A+WP V+     +P G     Q +    LPTINT +LL S +TL  AH  L
Sbjct: 133 NEVLWPTFEAMWPLVS-----TPGGTTT--QEMSAAGLPTINTVILLISSITLHFAHVGL 185

Query: 182 RAGHRAQTIRFMWMTVLLGLIFLGVQAYEYHHLYTELNLKLSSGTYGSTFFMLTGFHGLH 241
               R Q    + +T+LLG  FL +Q  EY H Y +L L L SG YG+TFFMLTGFHG+H
Sbjct: 186 EQNKRKQLTLMLGITILLGCGFLFLQVEEYIHAYRDLGLTLQSGIYGNTFFMLTGFHGMH 245

Query: 242 VFIGMLMLLFITLRLRKGHFTPERHFGFEGAAWYWHFVDVVWLGLYMLVYWL 293
           V +G ++L+ +  R+ KGHFTPE HF F+  +WYWHFVDVVW+ LY+ VY L
Sbjct: 246 VTLGTIILIVLFFRVLKGHFTPENHFAFQAGSWYWHFVDVVWVMLYIFVYVL 297