Pairwise Alignments

Query, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 672 a.a., cytochrome o ubiquinol oxidase subunit I from Pseudomonas simiae WCS417

 Score =  381 bits (979), Expect = e-110
 Identities = 197/513 (38%), Positives = 302/513 (58%), Gaps = 16/513 (3%)

Query: 30  WRRWVFATNHKDIGTLYLLFSFTMLMVGGVLALLIRAELFQ-----PGLQLVNPELFNQF 84
           W  W+ + +HK IG +Y++ +  ML+ G   A+++R +L       PG   + PE ++Q 
Sbjct: 45  WTEWLTSVDHKKIGVMYVIVAMVMLLRGFADAIMMRTQLAMATEGSPGY--LPPEHYDQI 102

Query: 85  TTMHGLIMVFGAIMPAFVGFANWMIPLQVGASDMAFARMNNFSFWLLIPAALMLVGSFFM 144
            T HG+IM+    MP F G  N  +PLQ+GA D+A+  +N+ SFWLL+ + ++L+     
Sbjct: 103 FTAHGVIMIIFMAMPFFTGLMNLALPLQIGARDVAYPFLNSLSFWLLV-SGVVLINVSLG 161

Query: 145 PGGAPAAGWTLYAPLT-LQMGPSM--DAGIFAMHIMGASSIMGSINIIVTILNMRAPGMT 201
            G     GW  Y PL+ LQ  P +  D  I+A+ + G  + +  +N + T+L MRAPGM 
Sbjct: 162 VGEFAKTGWVAYPPLSGLQYSPGVGVDYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMK 221

Query: 202 LMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWF 261
           LM MP+F WT      L++A  P+LA  + +   DR+     F    GG+P+MY ++FW 
Sbjct: 222 LMDMPIFTWTCTWANVLIVASFPILAATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWA 281

Query: 262 FGHPEVYIMILPAFGIISQVVPAFARKKLFGYASMVYATSSIAILSFIVWAHHMFTTGMP 321
           +GHPEVYI+ILPAFGI S+V+  F  K+LFG+ SMVYA+ +I++L F+VW HH FT G  
Sbjct: 282 WGHPEVYILILPAFGIFSEVISTFTGKRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSG 341

Query: 322 LTGQLFFMYATMLIAVPTAVKIFNWIATMWQGSMTFETPMLFAVGFIFVFTMGGFTGLIL 381
            +   FF  ATMLI++PT VK+FNW+ T++ G +   + +L+ +GF+  F +GG TG++L
Sbjct: 342 ASVNAFFGLATMLISIPTGVKLFNWLFTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLL 401

Query: 382 AVAPIDTQLQDTYYVVAHFHYVLVAGSLFAMFSGFYYWVPKWTGVMYNETRGKVHFWWSL 441
           A+   D  L ++ +V+AHFH V++ G++F   +GF ++ PK  G   +E  GK  FW+ +
Sbjct: 402 AIPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWI 461

Query: 442 ISFNVTFFPMHFLGLAGMPRRY-ADYPMQFADFNAVASVGAFFFGFAQVYFFLFVVFPTM 500
             F V F P++ LG  GM RR  A    ++  +  VA  GA       +   L  ++ ++
Sbjct: 462 SGFFVAFMPLYALGFMGMTRRLNATTNPEWVPYLYVAMFGAVMIAVG-IACQLIQLYVSV 520

Query: 501 RGKGEKAAQK--PWEGAEGLEWEVPSPAPFHTF 531
           R + + A +   PW G   LEW   SP PF+ F
Sbjct: 521 RDRKQNACESGDPWNG-HTLEWSTSSPPPFYNF 552