Pairwise Alignments

Query, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 559 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  638 bits (1646), Expect = 0.0
 Identities = 307/561 (54%), Positives = 397/561 (70%), Gaps = 25/561 (4%)

Query: 1   MSAVLDPHGHAVPGGHAHDEHHDHHAPTGWRRWVFATNHKDIGTLYLLFSFTMLMVGGVL 60
           M+ +   H     G HAHD H   H P  ++RW  +TNHKDIGTLYL+F+    ++GG +
Sbjct: 1   MTTITADHHGDHHGDHAHDHHDADHKPAFFQRWFMSTNHKDIGTLYLIFAIMAGLIGGAI 60

Query: 61  ALLIRAELFQPGLQLVNP----------------ELFNQFTTMHGLIMVFGAIMPAFVG- 103
           + L+R EL +PG+Q ++                  L+N   T HGLIMVF  +MPA +G 
Sbjct: 61  SGLMRMELREPGIQFLHIWAQWSDGPAATLDQAYHLWNVLITAHGLIMVFFMVMPAIIGG 120

Query: 104 FANWMIPLQVGASDMAFARMNNFSFWLLIPAALMLVGSFFMPGGA---PAAGWTLYAPLT 160
           F NW +P+ +GA DMAF RMNN SFWLLIPA L+L+GS F+PGG       GWT+YAPL+
Sbjct: 121 FGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFLLLLGSTFVPGGTGNGAGTGWTVYAPLS 180

Query: 161 LQ--MGPSMDAGIFAMHIMGASSIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYL 218
                GP++D  I ++HI GASSI+G+IN I TILNMRAPGMTL KMP+F W+ L+TA+L
Sbjct: 181 TSGSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFL 240

Query: 219 LIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGII 278
           L+  +PVLA AITM LTDR+FGT+F++ AGGGDP +YQH+FWFFGHPEVYIMILP FGI+
Sbjct: 241 LLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIV 300

Query: 279 SQVVPAFARKKLFGYASMVYATSSIAILSFIVWAHHMFTTGMPLTGQLFFMYATMLIAVP 338
           SQ+V  F+RK +FGY  M YA  +I ++ F+VWAHHMFTTGM +  +++F  ATM+IAVP
Sbjct: 301 SQIVSTFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVP 360

Query: 339 TAVKIFNWIATMWQGSMTFETPMLFAVGFIFVFTMGGFTGLILAVAPIDTQLQDTYYVVA 398
           T +KIF+WIAT+W GS++F+TPM++A+GFIF+FT+GG TG++LA   +D  L DTYYVVA
Sbjct: 361 TGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVA 420

Query: 399 HFHYVLVAGSLFAMFSGFYYWVPKWTGVMYNETRGKVHFWWSLISFNVTFFPMHFLGLAG 458
           HFHYVL  G++F++F+GFYYW PK TG MYNE  G++HFW   I  N+ FFPMHFLGL+G
Sbjct: 421 HFHYVLSLGAVFSLFAGFYYWFPKMTGRMYNEVLGQLHFWVFFIGVNLLFFPMHFLGLSG 480

Query: 459 MPRRYADYPMQFADFNAVASVGAFFFGFAQVYFFLFVVFPTMRGKGEKAAQKPW-EGAEG 517
           MPRRY DYP  FA +N +A+ G        + F + V +    GK  KA   PW EGA  
Sbjct: 481 MPRRYPDYPEAFAYWNKIATHGYEIMAVGVLIFLVNVFWSLFAGK--KAEGNPWGEGATT 538

Query: 518 LEWEVPSPAPFHTFENPPKLD 538
           LEW + SP P+H FE  P +D
Sbjct: 539 LEWTLTSPPPYHQFETLPVID 559