Pairwise Alignments

Query, 392 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

 Score =  312 bits (799), Expect = 1e-89
 Identities = 160/353 (45%), Positives = 227/353 (64%), Gaps = 11/353 (3%)

Query: 41  LNLPVGVTKIAQEQHLLHTIMMILCTVIFVAVFAVMFYSIWKHRKSVGHKAANFHESVVV 100
           +N+  G T+++     LH  +  +C +I + VF  MF+S+  HR+S G +AA+FHE   V
Sbjct: 26  VNMHPGATEVSNAVFDLHMTIFWICVIIGIVVFGAMFWSMVIHRRSTGQQAAHFHEHTWV 85

Query: 101 EVIWTIVPFLIVIVMALPATKVLVAQKDTTNADLTIKTTGYQWKWGYDYLNGEGEGLAFI 160
           E++WT+VPFLI++VMA+PATK L+   D + +D+ ++ TGYQWKW Y YL   G+ + F 
Sbjct: 86  EILWTVVPFLILVVMAIPATKTLIDIYDASESDIDVQVTGYQWKWHYKYL---GQDVEFF 142

Query: 161 STLDSSQRAMSDAGAKGAMPDDYLLKVDYPLVVPVNKKIRIITTANDVIHAFAVPQLGLK 220
           S L +    + +   K    + YLL+VD PLV+PV  K+R + TA DVIH++ VP   +K
Sbjct: 143 SNLATPTDQIHNKAPKD---EHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVK 199

Query: 221 QDAIPGFVRDTWFRAETIGTYYGQCQELCGKEHAFMPIQVKVVSAADYTAWVADQRKIAA 280
           +DAIPGFV + W R E  G Y GQC ELCGK+H FMP+ V+V S ADY  W+  +RK  A
Sbjct: 200 RDAIPGFVNEAWTRIEKPGIYRGQCTELCGKDHGFMPVVVEVKSKADYDTWLG-ERKAEA 258

Query: 281 AKLDDPT-KVWTLPDMLVRGEKVYAANCAACHQANGKGAGPI-KALDGDPKVLDADHSVQ 338
           AKL + T K WTL +++ RG+KVY   C ACHQA G+G  P+  AL G  K+        
Sbjct: 259 AKLKELTSKEWTLEELVERGDKVYHTTCVACHQAEGQGLPPMFPALKGS-KIATGPKEGH 317

Query: 339 LHVLLNGQNNGAMPSW-KQLSDTDLAAVATYTKNSWSNKTGQLVQPAEVLALR 390
           L ++ +G+   AM ++ KQLS+ D+AAV TY +N+W N  G +V P +VLAL+
Sbjct: 318 LSIVFHGKPGTAMAAFGKQLSEVDIAAVVTYERNAWGNNKGDMVTPKDVLALK 370