Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  172 bits (435), Expect = 1e-47
 Identities = 116/363 (31%), Positives = 184/363 (50%), Gaps = 45/363 (12%)

Query: 1   VLSYVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGRGGGGGGFESGGGS 60
           +LS++ +RL L IPT  G+ L+TF +I+ +PG PVE  + E +                 
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERR----------------- 43

Query: 61  YRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVWTLILEKLP 120
                 VDP+   Q     G +KP   +    +G+ A+ DLG+S    + VW   L   P
Sbjct: 44  ------VDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFP 97

Query: 121 VSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLGVALLVVFG 180
            ++ L       +  V +  GV  A++ G+ FD     I L GY++P F  G+ L++ F 
Sbjct: 98  ATLELAFAALLFAGVVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFS 157

Query: 181 GQLQWFPLRGLTSANWD-DLSWGARIVDYL------------WHITLPVTAMVLGS--FA 225
             L W P+ G     +D +   G  ++D L             H+ LP  A+VLG+   A
Sbjct: 158 VSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAVMHLILP--AIVLGTIPLA 215

Query: 226 VTAMLTKNAFLEEIRKQYVLTARAKGLGERQVLWKHVFRNALIPIIT--GLPSAFIGAFF 283
           V A +T+++ LE +R+ Y+ TARAKGL   +V++ H  RNALIP++T  GL    +G   
Sbjct: 216 VIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQ---VGTLL 272

Query: 284 AGSLLIETLFSLDGLGLLGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRV 343
           AG++L ET+FS  G+G    E++  RDYPVV   + L   + ++   + D+ Y   +PR+
Sbjct: 273 AGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGLANPRI 332

Query: 344 KFE 346
           + +
Sbjct: 333 RHQ 335