Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 342 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  374 bits (960), Expect = e-108
 Identities = 194/346 (56%), Positives = 256/346 (73%), Gaps = 6/346 (1%)

Query: 1   MDLSIASILTLDGLTNGAIYALLGMGIVLVFTVTRVIFIPQGEFVAYGALTLAIFQTGKT 60
           MDL IA +L  DG+ NGA+Y L+ + +VLVF+VTRVIFIPQGEFVA+GAL++A  Q G+ 
Sbjct: 1   MDLQIALLLGQDGIVNGAVYGLMALALVLVFSVTRVIFIPQGEFVAFGALSMAALQGGRA 60

Query: 61  PGTVWLLLILAGVAALMDLVTIWRHSGSAAAGLKAALR-TFALPAVVCAVSAWAGPRNLP 119
           P T+WLLL LA   A++ +V  WR    A    ++AL    A PAV   +     P +L 
Sbjct: 61  PSTLWLLLALA---AIVLVVEAWRWKRGATVDWRSALTWCVAFPAVAAVLILGFKPTSL- 116

Query: 120 IGVQALLTVFIVTAFGPLVYRVAYQSLAGASSLVLLIVSVGVHFAMTGLGLLFFGAEGFR 179
             +Q+L T+ ++   GPL+YRVAY+ LA AS L+LLIVSV +H  + GLGL FFGAEG R
Sbjct: 117 -AMQSLATLVLIAPLGPLLYRVAYRPLADASVLMLLIVSVALHGVLVGLGLFFFGAEGSR 175

Query: 180 NPPFWDERMALGPLNVSGQALIIFGVSAALIVLLWLFFERSLYGKALRATAVNRLGARLM 239
              F + R  LG + V+GQ+L++ GV+  L++ ++ FF RS+ GKALRATA+NR+GARL 
Sbjct: 176 TSAFSEARFDLGGIPVNGQSLVVVGVTLVLVIAMFWFFGRSMIGKALRATAINRVGARLS 235

Query: 240 GISTQAAGQLTFAMAALIGALSGLLIGPTTTVFYDSGFLIGLKGFVAGVIAGLASYPGAL 299
           GI T+ +G L+FA+AA+IGA+SGLLI P TTV+YD+GFLIGLKGFVA ++ GLASYP AL
Sbjct: 236 GIPTELSGDLSFALAAVIGAISGLLIAPITTVYYDTGFLIGLKGFVAAIVGGLASYPLAL 295

Query: 300 VGALAVGVIEAFGSFWASSFKEVIVFTIILPVLLWRSLRSGHSDEE 345
            GAL VG++EAF SFWAS++KEV+VFT+I+PVLLWRSL S H ++E
Sbjct: 296 AGALLVGLLEAFSSFWASAYKEVLVFTLIIPVLLWRSLNSHHVEDE 341