Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  107 bits (266), Expect = 5e-28
 Identities = 86/345 (24%), Positives = 152/345 (44%), Gaps = 77/345 (22%)

Query: 11  LDGLTNGAIYALLGMGIVLVFTVTRVIFIPQGEFVAYGALT----LAIFQTGKTPGTVWL 66
           ++GL  G++YAL+ +G  +V+ +  +I    G+ +  GALT    +       T    WL
Sbjct: 9   INGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIGWMMNASTGLPTWL 68

Query: 67  LLILAGVAALMDLVTIWRHSGSAAAGLKAALRTFALPAVVCAVSAWAGPRNLPIGVQALL 126
           +L LA + A+                            VVCA   +              
Sbjct: 69  ILFLATIIAM----------------------------VVCATLNFT------------- 87

Query: 127 TVFIVTAFGPLVYRVAYQSLAGASSLVLLIVSVGVHFAMTGLGLLFFGAEGFRNPPFWDE 186
                      + ++AY+ L  ++ L  LI ++G+   +    ++ +      NP  +  
Sbjct: 88  -----------IEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAMIIWAP----NPKSYPS 132

Query: 187 RMALGPLNVSG------QALIIFGVSAALIVLLWLFFERSLYGKALRATAVNRLGARLMG 240
            ++  P+ + G      Q +I+   +  L  L+WL   R+  G+A+RATA N   A LMG
Sbjct: 133 MLSREPIAIGGAVVSVTQVVILATTAVTLAFLMWLV-NRTNLGRAMRATAENPRVAALMG 191

Query: 241 ISTQAAGQLTFAMAALIGALSGLLIGPT-TTVFYDSGFLIGLKGFVAGVIAGLASYPGAL 299
           I        TF + A++ A++G++      TV +  GF+ GLK FVA V+ G+ +  GA+
Sbjct: 192 IKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFVAAVMGGIGNLAGAV 251

Query: 300 VGALAVGVIEAFGSFW---------ASSFKEVIVFTIILPVLLWR 335
           VG +A+G+IE+ G+ +          S + ++  F ++  VL  R
Sbjct: 252 VGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLR 296