Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 91/327 (27%), Positives = 142/327 (43%), Gaps = 59/327 (18%)

Query: 11  LDGLTNGAIYALLGMGIVLVFTVTRVIFIPQGEFVAYGALTLAIFQTGKTPGTVWLLLIL 70
           L+GL  GA+YAL+ +G+ L++ V  +I    G       LT A+F        VW+    
Sbjct: 12  LNGLMTGAVYALIALGLTLIYGVLHIINFAHGAL-----LTCAMF-------AVWIA--- 56

Query: 71  AGVAALMDLVTIWRHSGSAAAGLKAALRTFALPAVVCAVSAWAGPRNLPIGVQALLTVFI 130
                       W                           AW G   +   +  L  V +
Sbjct: 57  ------------W---------------------------AWLG---MDPYLAILPLVPL 74

Query: 131 VTAFGPLVYRVAYQSLAGASSLVLLIVSVGVHFAMTGLGLLFFGAEGFR-NPPFWDERMA 189
           + A G  + R      +      +L+V++G+   +  + L  F ++    +  +  + +A
Sbjct: 75  MFALGYGLQRFVIGPASHGDDGNILLVTLGLSIVLENVLLAVFQSDTRTLDTDYSFQVVA 134

Query: 190 LGPLNVSGQALIIFGVSAALIVLLWLFFERSLYGKALRATAVNRLGARLMGISTQAAGQL 249
           LGPL +S   LI  GV+  +  LLWL   R+  GKA+RA A  +LGA L+GI       +
Sbjct: 135 LGPLLLSYPRLIGLGVAVVVTGLLWLVLNRTDTGKAIRAVAKEKLGANLVGIDVPHVYAV 194

Query: 250 TFAMAALIGALSGLLIGPTTTVFYDSGFLIGLKGFVAGVIAGLASYPGALVGALAVGVIE 309
           TF +     A++  L+ PT  V    G    L  F   V+ G+ S PGAL+G L +GV+E
Sbjct: 195 TFGLGCACLAVAAGLLMPTFYVNPRIGGAFVLVAFTVVVLGGMGSLPGALLGGLFIGVVE 254

Query: 310 AF-GSFWASSFKEVIVFTIILPVLLWR 335
           +  G F   S  ++ +F I + VLL R
Sbjct: 255 SLCGLFLGDSLGQIGIFLIFIAVLLVR 281