Pairwise Alignments

Query, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  440 bits (1131), Expect = e-128
 Identities = 258/593 (43%), Positives = 339/593 (57%), Gaps = 23/593 (3%)

Query: 2   DYQPRPEDVRFLLNAVLDAP---TRLAALAPFAEVDEALQSQVLEEAGRFVGEVIAPLNR 58
           DY+    D+RF+LN V +     T+L  LA   + D A+   VLEEAG+     IAPL+R
Sbjct: 3   DYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMA--VLEEAGKVTARTIAPLSR 60

Query: 59  GGDETGCRFAGGEVASPPGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAA 118
             DE GC +  G V +P GF EAY  + +GGW  +   P  GG G+P  + A + E + A
Sbjct: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120

Query: 119 ANHGFTMAPGLLHGAYACLKHHGSDELKQRYLSKIATGEWLATMCLTEAHAGSDLGQVRT 178
           ++  F + P L  GA   +  H S+ LK++YL  +  G W  +MCLTE HAG+DLG +RT
Sbjct: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 179 RAVPQADGSVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPD- 237
           +A PQADGS +VSG KIFI+GGEHDLT NI+HLVL +LPDAP GPKG+SL LVPK L + 
Sbjct: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240

Query: 238 ----GARNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHV 293
               GARN   C  IE KMG+  S TC M FD+A G++VGEP +GLAAMF MMN  RL V
Sbjct: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300

Query: 294 ALQGIGLLDAAWQKADAYAAERRQMRAPGPVPASRGGESADLIAEHPAVRRILDTQRAWI 353
            +QG+   + ++Q A  YA +R Q RAP    A    ++AD I  HP VRR+L T +A I
Sbjct: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAK--DKAADPIIVHPDVRRMLLTMKALI 358

Query: 354 DGARALAYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFG 413
           +G RA +   A+ LD A +  DA  R+R++   + +TPV KA  T      A    QVFG
Sbjct: 359 EGGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFG 418

Query: 414 GHGYVREWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRDTL-D 472
           GHGY+REWG EQ+VRD R+T IYEGTN IQA+DL+ RKV+  GGA       E+R  +  
Sbjct: 419 GHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITG 478

Query: 473 ASREAD---ADVQRRLAQLRYLGTTVAMAAHANPALPYEVADDYLRVAMLTMLAWAWARI 529
           A  E D     +   L QL  L   V   A  NP      + +YL         + WA +
Sbjct: 479 AGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538

Query: 530 -------EAAAPRDAARARVAAAFRRWVLPEFEMRLGIVKRACETVALTHAAQ 575
                  E  AP  + +   A  +   +LP  +  +  VK   E++ L  A Q
Sbjct: 539 ARAALAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQ 591