Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  378 bits (970), Expect = e-109
 Identities = 183/338 (54%), Positives = 250/338 (73%), Gaps = 1/338 (0%)

Query: 7   HISP-GRRAWLRFKRNRLGFWSLVIFTVMVVLSLFAEVLSTDKPLVLRYEGRTYFPVLRD 65
           ++SP  RR + RFK N+ G+WSL +F  + VLSL AE+++ DKPL + Y+G  YFP L+ 
Sbjct: 2   NLSPLNRRRFERFKANKRGWWSLWLFLSLFVLSLGAELIANDKPLAVHYDGGWYFPALKR 61

Query: 66  YSEKTFGGDFETPADYLDPYIRDRITQGDNWAIYAPNPYGPKTLNYFAKAPSPAAPTADN 125
           Y E TFGG+F   A+Y  PYI++ +   D W ++AP P+  +++NY  K P+PA P++ N
Sbjct: 62  YPETTFGGEFPLEANYKSPYIQELLKAKDAWTLWAPIPFSYQSINYDLKVPAPAPPSSVN 121

Query: 126 IFGTDDRGRDLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGAVQGYFAGKVDLAFQRFIE 185
             GTDD+GRD+LA++IYGFRVSVLF L LT + +++GV AGA+QG++ G VDLA QRF+E
Sbjct: 122 WLGTDDQGRDVLARVIYGFRVSVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLE 181

Query: 186 IWSSMPELYLLIIFSAIFAPSVALLLILLSLFGWMGLADYVRAEFLRNRQMDYVRAARAL 245
           IWS +P LYLLII ++   P+   LL ++ LF WM L D VRAEFLR R ++YVRAARAL
Sbjct: 182 IWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARAL 241

Query: 246 GVSNLQIMWRHILPNSMVPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLSQGK 305
           G+ N  IM+RHILPN+MV  +TF+PF ++ AI  LT+LDFLG G+P G+PSLGEL++QGK
Sbjct: 242 GMQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGK 301

Query: 306 ANIDAWWISISTFGVLVVTLMLLTFMGDALRDALDPRK 343
           +N+ A W+ +S F VL + L LL F+G++ RDA DPRK
Sbjct: 302 SNLQAPWLGMSAFAVLAIMLSLLVFIGESARDAFDPRK 339