Pairwise Alignments

Query, 488 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  166 bits (421), Expect = 1e-45
 Identities = 123/407 (30%), Positives = 196/407 (48%), Gaps = 8/407 (1%)

Query: 12  LALMVLCLGVLMIVLDTTIVNVALPSIRTDLGFTETSLVWVVNAYMLTFGGFLLLGGRLG 71
           L  + L L   M VLDTTI NVALP+I  +LG +     WV+ ++ ++    L L G L 
Sbjct: 16  LTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLS 75

Query: 72  DLYGHRKLFLIGLVLFTLASLACGISNSQVLLVAARAVQGLGGAVVSAVSLSLIMNLFTE 131
             +G  KLF+   +LF LAS  CGI+ S   LV  R +QG+    +  ++ +L++ ++  
Sbjct: 76  RRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVY-P 134

Query: 132 PAERAKAMGVYGFVCAGGGSIGVLLGGLLTSTLSWHWIFLVNLPIGVAVYALCVALLPSA 191
           PA+R  A+ +   V       G +LGG +T + SW WIF +N+PIG+   A+    + + 
Sbjct: 135 PAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTR 194

Query: 192 RGHAHGEKLDVAGAVTVTLSLMLAVYGVVNGNEAGW--GSTQTVGLLGAAVVLLAVFIAI 249
                 + +D  G +T+ + +      +  GN+  W   S   VG L  +VV LAVF+  
Sbjct: 195 PVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSL-ISVVFLAVFVIW 253

Query: 250 EARVQHPLMPLGLFRLRSVSVANVVGVLWAAAMFAWFFISALYMQLVLQYTPMQIGLAFL 309
           E   +HP++ L LF  R+  +  +V V   A  F    I   ++Q  + YT    GLA  
Sbjct: 254 ELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVA 313

Query: 310 PANIIMAVFSLGLSAKIVMRFGIRKPLAAGLWLAAIGLALFARAPVNGSF-VVDVLPGMM 368
           P  ++  + S     K   RF +R  + AGL   AIG + + RA          V    +
Sbjct: 314 PIGLLPVIMS-PFVGKYAHRFDLR--VLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQL 370

Query: 369 LLGLGAGMAFNPMLLAAMSEVSPSDSGLASGVVNTAFMMGGALGLAV 415
            +G+G  + F P L   +S++ P      SG+      +GG+   ++
Sbjct: 371 FMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASL 417