Pairwise Alignments

Query, 540 a.a., Transcriptional regulatory protein RtcR from Variovorax sp. SCN45

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  154 bits (389), Expect = 7e-42
 Identities = 96/240 (40%), Positives = 134/240 (55%), Gaps = 11/240 (4%)

Query: 194 LIDEIERVAVRSRAPILLVGPTGAGKSFLARRMFELKQSRHQMTGPFVEVNCATLRGDGA 253
           L++   RVA RS + +L+ G +G GK  LAR    + Q   +   PFV +NCA +  +  
Sbjct: 138 LLELAARVA-RSDSTVLISGESGTGKEVLARY---IHQQSPRAAQPFVAINCAAIPDNML 193

Query: 254 ASTLFGHRKGSFTGAAADRAGLLRTAHQGALFLDEIGELGLDEQAMLLKAIEEKRFFPVG 313
            +TLFGH KG+FTGA A +AG    A  G L LDEI E+ +  QA LL+ ++E+    VG
Sbjct: 194 EATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKLLRVLQEREVERVG 253

Query: 314 ADKEVESDFQLIAGTNRDLRSDVADGRFREDLFARINLWTYDLPGLAQRPEDIEPNVDHL 373
             K +  D +++A TNRDL  +VA GRFREDL+ R++++      L +RP DI    + L
Sbjct: 254 GRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLRERPGDILQLAERL 313

Query: 374 LAIHAAE-NHRVVRFNAEARAAYLRFAQSGEAVWSGNFRDLSASVTRLATLADGGRIPVA 432
           LA H A+  H  VR +  ARA    +A      W GN R+L  ++ R   L  GG I  A
Sbjct: 314 LARHVAKMKHASVRLSPAARACLQAYA------WPGNVRELDNALQRALILQQGGVIEAA 367