Pairwise Alignments

Query, 261 a.a., Pca regulon regulatory protein PcaR from Variovorax sp. SCN45

Subject, 282 a.a., predicted DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  101 bits (252), Expect = 1e-26
 Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 6/248 (2%)

Query: 19  QSFARGLQVIRSFSANAPHQTLSEVAAVSGLTRAGARRILLTLQTLGYVVTDGKL--FTL 76
           QS  RGL +I   S       L+ ++ ++GL ++   R+L  LQ+ GYV T      + L
Sbjct: 24  QSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRL 83

Query: 77  TPRILDLGFAYLSSMPIWNRAEPVMEALVQQVQESCSAAVLDATDIVYVLRV-PTKKIMH 135
           T + + +G   LSS+ I + A P +EAL     E+ + +  +    + + ++ PT  ++ 
Sbjct: 84  TTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLR 143

Query: 136 INLGVGSRLPAYCTSLGRLLLADLPDDEVRARLEAS--EIEALTKHTVTDIDALMAKVAQ 193
               +G  +P YC+++G++ +A    D V++  E+   EI+ LT++T+T++ A+  ++A 
Sbjct: 144 TRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAH 203

Query: 194 ARKQQWCLVNQELEEGLVSVAAPIVDRQGRMVAALNISGQANRTSAKAMQETMLPALRES 253
            R+    +  +E E G+  +A P+ D  GR+  A++IS   +R   +  ++ +L  LRE+
Sbjct: 204 IRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSISLSTSRLK-QVGEKNLLKPLRET 262

Query: 254 ADRISRML 261
           A  IS  L
Sbjct: 263 AQAISNEL 270