Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  132 bits (331), Expect = 1e-35
 Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 6/288 (2%)

Query: 2   LETLVQGVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGAFAVIAGVSLTGDAVAPW 61
           L+ L+ GV    +  L A G  L+FGV ++ N A G F  LGA+  I  V L      P 
Sbjct: 5   LDVLLGGVFHAAILFLVAAGLQLVFGVQKVINLACGSFYALGAYFGITAVGLASAVGFPA 64

Query: 62  LVALAVLPVA---FGF-GYALQRYVLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSADP 117
              L VL +A    G  G  ++R +L     +D    L++TFGL ++ Q++    + A P
Sbjct: 65  WTVLPVLVLAGLVIGLVGLPVER-ILRTVYRRDESYQLLLTFGLLLMFQDVFRFFWGATP 123

Query: 118 RAIETGGLSTQGVALGSAMSVGVLPLVVLAIALLATGALQWLFARTALGRSFRAVSDDRE 177
           R ++   L+  G A    + V    L+V+A ++    AL     RT  GR  RA +++R+
Sbjct: 124 RTLDNAYLA-YGTAEFLGLRVPTYNLLVIAASIAIAVALGAFLQRTRTGRIIRATAENRD 182

Query: 178 IAELMGLNAKKVYAFATAIAFVLIAIAGALQGMRTTVSPSDGPLLLLFAFEAVIIGGMGS 237
           ++E +G+N+ +V+A    +  +L  + GAL    +  S      L++ AF  V+IGG+GS
Sbjct: 183 MSEGLGVNSSRVFAAVFTVGCMLGTVGGALVVPASASSLDMAVELVVEAFAVVVIGGLGS 242

Query: 238 FWGTLAGAMILGITQQIGFRLDPGWGIWFGHIVFLVVLVLRPQGLFPK 285
             G LAGA+I+G+ +     + P   I   ++V + VL+LRP GLF K
Sbjct: 243 MRGALAGALIVGLIRAAAIMVLPEAEILSIYLVVIAVLILRPAGLFGK 290