Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 1e-29
 Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 9/290 (3%)

Query: 2   LETLVQGVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGAFAVIAGVSLT---GDAV 58
           L+ LV G+ LG +Y L A+G ++++G++ + N A G+  ++ A+     ++L    G   
Sbjct: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIES 65

Query: 59  APWLVA---LAVLPVAFGFGYALQRYVLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSA 115
            P L+    +  + V   +G+ ++R           L  L+   G+S+++QN       A
Sbjct: 66  FPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGA 125

Query: 116 DPRAIETGGLSTQGVALGSA-MSVGVLPLVVLAIALLATGALQWLFARTALGRSFRAVSD 174
             + I T       V +GS  + +    + +L  A      L ++   T LGR  RA   
Sbjct: 126 KQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRATQQ 185

Query: 175 DREIAELMGLNAKKVYAFATAIAFVLIAIAGALQGMR-TTVSPSDGPLLLLFAFEAVIIG 233
           DR++A ++G+N  +V ++   I   + A+AG L  +   T     G ++ + AF A ++G
Sbjct: 186 DRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAVLG 245

Query: 234 GMGSFWGTLAGAMILGITQQI-GFRLDPGWGIWFGHIVFLVVLVLRPQGL 282
           G+GS  G + G +ILGI++ +    ++  +   F   + +V+L+ RPQGL
Sbjct: 246 GIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGL 295