Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 4e-33
 Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 11/286 (3%)

Query: 3   ETLVQGVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGAFAVIAGVSLTGDAVAPWL 62
           E L+ G+L G +Y+L A+G  L++    + N AQG  ++   FA +  VSL    V  WL
Sbjct: 6   EVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVL---FAALTFVSLLERGVPFWL 62

Query: 63  VALAVLPVAFGFGYALQRYVLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSADPRAIET 122
             L  L         ++R VL   +G+ P+   + T GL+ +I+     L+ A    +E 
Sbjct: 63  SFLVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGAQVHGLEL 122

Query: 123 GGLSTQGVALGSAMSVGVLPLVVLAIALLATGALQWLFARTALGRSFRAVSDDREIAELM 182
             +S   + LG  + +    L   A A      L  LF RT +G + RAV+DD   A  +
Sbjct: 123 A-ISDAPLELGGLL-LSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMSV 180

Query: 183 GLNAKKVYAFATAIAFVLIAIAGALQGMRTTVSPSDGPLLLLFAFEAVIIGGMGSFWGTL 242
           G+   +V+A   A+A  +  +AG L G R  V  S   L++L A   +IIGG  S  G +
Sbjct: 181 GIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLS-LVVLKALPVLIIGGFTSISGAI 239

Query: 243 AGAMILGITQQI-----GFRLDPGWGIWFGHIVFLVVLVLRPQGLF 283
            G +I+G ++++     G  +  G   WF +++ L+ L++RP GLF
Sbjct: 240 VGGLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLF 285