Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 9e-34
 Identities = 93/288 (32%), Positives = 148/288 (51%), Gaps = 13/288 (4%)

Query: 2   LETLVQGVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGAFAVIAGVSLTGDAVAPW 61
           LETL+ G+L G LY+L A+G  L++    + N AQG  ++   FA +  VSL    + P+
Sbjct: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLL---FAALTFVSLHEQGL-PF 60

Query: 62  LVALAVLPVAFGFGYAL-QRYVLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSADPRAI 120
            +ALA+  +    G  L +R VL   + +  +   + T GLS +I+ L   L  A  RA+
Sbjct: 61  ALALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRAL 120

Query: 121 ETGGLSTQGVALGSAMSVGVLPLVVLAIALLATGALQWLFARTALGRSFRAVSDDREIAE 180
           + G +    + +G  M +    LV   ++ L    L  LF +T +G + RAV+DD   A 
Sbjct: 121 DLG-IEDVPLFVGELM-ISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAAL 178

Query: 181 LMGLNAKKVYAFATAIAFVLIAIAGALQGMRTTVSPSDGPLLLLFAFEAVIIGGMGSFWG 240
            +G+N  +++    A+A ++  +AG L G R  V  S   L++L A   +IIGG  S  G
Sbjct: 179 SLGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLS-LVVLKALPVLIIGGFTSIGG 237

Query: 241 TLAGAMILGITQQ-----IGFRLDPGWGIWFGHIVFLVVLVLRPQGLF 283
            + G +I+G  +      IG  +  G   WF + + L+ L +RP GLF
Sbjct: 238 AIVGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLF 285