Pairwise Alignments

Query, 417 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 400 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 97/410 (23%), Positives = 156/410 (38%), Gaps = 59/410 (14%)

Query: 4   NRRQFTQATA-ALVASGAAPLVFAADT-----LKIGYVSPQTGPLAPFGEADK------W 51
           NRR + + TA AL A+  AP +FA  +     +KIGY   +TGP A   +  +      W
Sbjct: 5   NRRHWIKGTATALGAAAVAPQLFAQGSSSGGPVKIGYAIARTGPWAAGAQVSQEPNYLLW 64

Query: 52  VIDQMKAAFKDGIAVGGRKYAVQIVLKDSQSNPNRAGEVANDLILKDKVALVLTAGTPET 111
             +Q+ AA   G++V G K  ++++  D +S           L+  DKV LVL       
Sbjct: 65  A-EQVNAA--GGLSVKGTKRPIELIGYDDRSETETCVRTFEKLMGSDKVDLVLPPWGSGA 121

Query: 112 ANPVSDACELNEVPCVSSVVPWQ-------PWFFGRKGDPAKGFNWTYHMFWGLEDVIAN 164
              V+        P ++     +       P+FF     P K       M   L D++ +
Sbjct: 122 NFAVAPLANRFGYPLLAPTALSRKLIDMRLPFFFSLLQQPDK-------MMGALVDMLVS 174

Query: 165 FTNGWKTLATNKKVGGLFPNDGDGNAWGDKELGFPKPLAQMGFTLTDPGRFQNGTQDFSA 224
                 T+     + GL       NA           L +    + D   +  G +D + 
Sbjct: 175 QNVKTITIVYMDDLFGLENFAALNNA-----------LKKTSIQVLDRKSYPLGVKDLAP 223

Query: 225 QIAAFKSAGCEIVTGVVIPPDAKTFLTQARQQGFRPKVITLGKALLFPGAIEALGDLGDG 284
            +   K    +   G+  PPD      QAR+ GF PK         F      +    +G
Sbjct: 224 VLRTMKDLNPDAFIGITYPPDTILASRQAREVGFNPKYFYASVGTAFQLYKNVMAANTEG 283

Query: 285 LSTEVWWSPSHPFTSSLTQQSAKALADAYEAGTKKQWTQP----IGFAHALFEVAANALG 340
           +     W       +  T   AKA  DA+   TKK   +P     G A A  ++   A+ 
Sbjct: 284 VIGMGSW-------NGKTSPEAKAYFDAH---TKKFGKEPDRWASGHAWAGLQILQQAVE 333

Query: 341 RAKSLKASDVRDAVASTSINSVVGPVKWGGQGPFKNVSKTPLVLGQWGKG 390
           +   L    +R+ +A     +++GP+++ G    +N S  P  + QW  G
Sbjct: 334 KV-GLDRKALREQIAKNEFKTILGPIRFEGS---ENAS-IPGTVSQWQGG 378