Pairwise Alignments

Query, 417 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 98/394 (24%), Positives = 154/394 (39%), Gaps = 45/394 (11%)

Query: 11  ATAALVASGAAPLVFAADTLKIGYVSPQTGPLAPFGEADKWVIDQMKAAFKDGIAVGGRK 70
           A A   A G +  V A   +KIG   P TG  A FGE  +++     AA K   A G   
Sbjct: 12  ALAVATALGVSSYVQA--DVKIGVAGPMTGANAAFGE--QYMKGAQAAADKINAAGGVNG 67

Query: 71  YAVQIVLKDSQSNPNRAGEVANDLILKDKVALVLTAGTPETANPVSDACELNEVPCVSSV 130
             + +V  D    P +A  VAN L+ +DKV  V+         P S   E+ +   V ++
Sbjct: 68  EKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPAS---EVYDEAGVIAI 124

Query: 131 VPWQPWFFGRKGDPAKGFNWTYHMFWGLEDVIANFTNGWKT-LATNKKVGGLFPNDGDGN 189
            P             +G +  + M  G +D        +   +   KKV  L   D  G 
Sbjct: 125 TPGST----NPQVTERGLSAMFRMC-GRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQ 179

Query: 190 AWGDK-----ELGFPKPLAQMGFTLTDPGRFQNGTQDFSAQIAAFKSAGCEIVTGVVIPP 244
              D      E    KP+   G T         G +DFSA +   +S G ++V    + P
Sbjct: 180 GLADATKAQLEKRGVKPVLYEGLT--------RGEKDFSAVVTKIRSTGADVVYFGGLHP 231

Query: 245 DAKTFLTQARQQGFRPKVITLGKALLFPGAIEALG--DLGDGLSTEVWWSPSHPFTSSLT 302
           +A   + Q R+QG +         ++    +   G     DG+       P         
Sbjct: 232 EAGPLVRQLREQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPR-------L 284

Query: 303 QQSAKALADAYEAGTKKQWTQPIG---FAHALFEVAANALGRAKSLKASDVRDAVASTSI 359
              +KA+ + +    +K  T+P G   +A+A  +  A A   AKS K  D    + +  +
Sbjct: 285 LPDSKAVVEEF----RKAGTEPEGYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPV 340

Query: 360 NSVVGPVKWGGQGPFKNVSKTPLVLGQWGKGQKY 393
            +V+G  KW  +G   +++ +  V+ QW K  KY
Sbjct: 341 QTVMGEKKWDSKG---DLTVSDYVVYQWDKTGKY 371