Pairwise Alignments

Query, 474 a.a., sigma-54-dependent transcriptional regulator from Variovorax sp. SCN45

Subject, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

 Score =  191 bits (486), Expect = 4e-53
 Identities = 151/429 (35%), Positives = 216/429 (50%), Gaps = 36/429 (8%)

Query: 54  RPSVAIISVTVIDGGGL---AHATELLQGMPVIWVAAGSRERDSR--TYPPEYLHVLPYD 108
           +P V I  + +    GL   A   E    +PVI + A S + DS   +Y       LP  
Sbjct: 48  QPDVIISDIRMPGTSGLDLLAQIREQHPRLPVIIMTAHS-DLDSAVASYQGGAFEYLPKP 106

Query: 109 FTCAELRTMVAKLVRQLRAREV--APQ----APDVLVAHSDAMKSLLAEVGAFADCDHSV 162
           F   E  ++V +  +  + ++    PQ     P++ +  + AM+ +   +G  +  + +V
Sbjct: 107 FDVDEAVSLVKRANQHAQEQQGLDVPQNLARTPEI-IGEAPAMQEVFRAIGRLSHSNITV 165

Query: 163 LVRGETGVGKERIAQQLHLGHQHYSKGAFVAVNCGAIPDGLFESLFFGHTKGSFTGAVHA 222
           L+ GE+G GKE +A  LH  H   +   F+A+N  AIP  L ES  FGH KG+FTGA + 
Sbjct: 166 LINGESGTGKELVAHALHR-HSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANL 224

Query: 223 HRGYFEQATGGTLFLDEIGDLPRYQQVKLLRVLEDNAVTRLGATAPIRVDFRLVAATNRN 282
            RG FEQA GGTLFLDEIGD+P   Q +LLRVL D    R+G   P++VD R++AAT++N
Sbjct: 225 RRGRFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQN 284

Query: 283 LREMVASGEFRADLFYRLAVIELHVPSLEERGEVDKIAIFKALLSNVLGDELEALGETPH 342
           L  +V +G+FR DLF+RL VI +H+P L +R E        AL  + L    + L   P 
Sbjct: 285 LESLVQAGKFREDLFHRLNVIRIHIPRLADRRE-----DIPALARHFLARAAQELAVEPK 339

Query: 343 WLSDAVAETY----FPGNVRQLRNLAERVGVIA--RQLHSWD-----QNLIQRAIALTRG 391
            L     E      +PGNVRQ+ N    + V+A  R++   D      NL   A  +T  
Sbjct: 340 ILKPETEEFIRNLPWPGNVRQMENTCRWITVMASSREVLIGDLPPELLNLPHDAAPVTNW 399

Query: 392 TPAPAISADRNGAGGGGGIGLDGGSDRKGWNSGERNRIIAALEVNDWKRQDTAQHLGISR 451
             A    AD+  A G   + LD         S ER  I  AL+    +R+D A  LG  R
Sbjct: 400 EQALRQWADQALARGQTSL-LDSAVP-----SFERIMIETALKHTAGRRRDAALLLGWGR 453

Query: 452 KVLWEKMRK 460
             L  K+++
Sbjct: 454 NTLTRKIKE 462