Pairwise Alignments

Query, 474 a.a., sigma-54-dependent transcriptional regulator from Variovorax sp. SCN45

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  199 bits (506), Expect = 2e-55
 Identities = 127/352 (36%), Positives = 190/352 (53%), Gaps = 30/352 (8%)

Query: 112 AELRTMVAKLVRQLRAREVAPQAPDVLVAHSDAMKSLLAEVGAFADCDHSVLVRGETGVG 171
           A LR  VA+L +Q+ A+       D ++ H+ A+K         A  D +VL+ GETGVG
Sbjct: 125 ARLRKRVAELEKQVEAKFTL----DTIIGHTPALKQAKELTARVAATDSTVLLEGETGVG 180

Query: 172 KERIAQQLHLGHQHYSKGAFVAVNCGAIPDGLFESLFFGHTKGSFTGAVHAHRGYFEQAT 231
           KE  AQ +H      SK  FVAVNC A P  L ES  FG+ KG+FTGA+   +G FE+A 
Sbjct: 181 KELFAQAIHSASPRRSK-PFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEAN 239

Query: 232 GGTLFLDEIGDLPRYQQVKLLRVLEDNAVTRLGATAPIRVDFRLVAATNRNLREMVASGE 291
           GGT+FLDEIG++P   Q K LRVLE  + T+LG T P++V+ R+VAATNR+L+    +  
Sbjct: 240 GGTIFLDEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADR 299

Query: 292 FRADLFYRLAVIELHVPSLEER-GEVDKIA-IFKALLSNVLGDELEALGETPHWLSDAVA 349
           FR DL+YRL+V ++ VP+L ER  ++  +A  F  L +  +   LE + E        + 
Sbjct: 300 FRPDLYYRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEE---FIQKLK 356

Query: 350 ETYFPGNVRQLRNLAERVGVIARQLHSWDQNLIQRAIALTRGTPAPAISADRNGAGGGGG 409
              + GN+R+L+N+ ER  ++A      ++ L    +     T AP++ A  +       
Sbjct: 357 HYPWKGNIRELKNVMERAVILAD-----EEKLTPEHLPAEFWTAAPSLEASESDT----- 406

Query: 410 IGLDGGSDRKGWNSGERNRIIAALEVNDWKRQDTAQHLGISRKVLWEKMRKY 461
                       ++ ER  I+  LE  D  + + A+ L I    L+ K+++Y
Sbjct: 407 ----------SLSTVERKHIMKILEQTDGNKTEAARRLHIGLTTLYRKVQEY 448