Pairwise Alignments

Query, 522 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 452 a.a., putative Outer membrane efflux protein from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 8e-13
 Identities = 76/326 (23%), Positives = 128/326 (39%), Gaps = 13/326 (3%)

Query: 147 QRAAE--AGNQADDEAVVT---TSQKVVLDALTAYLQVQRYDLKKQIAHKATEVVAELSK 201
           Q+ AE   G Q  D +V      SQ   +    AY  V        +A        E   
Sbjct: 112 QKMAEYRQGQQRADYSVAVFDAKSQDAAVRLADAYFDVLLASETITLAKAKLSAFEEQLA 171

Query: 202 AEARRVALGVTGDNDLNMAASRRALVAARESDFEAQRDEAMAKFRNYFKFSPNA-ESLPV 260
           +  RR+ LG     D++ + +RR L  A   D +     A  K   Y   +P A  +L  
Sbjct: 172 SAKRRMELGAGTITDVDESVARRDLAEADLIDAQDNLVNARRKLEEYIGETPQALTTLQA 231

Query: 261 LAAPPQWRIGSQEEALRRAEARSTEIAEAQGRIERARALADQQDASLYPTVDAVIVKTRD 320
             + P    G+ +E L +A+A S  I   +     A    ++  +  YPT+D V   T  
Sbjct: 232 GFSTPPLMPGNLQEWLVKAQADSPLIHARRHSYALAEEEVNRARSGHYPTLDFVAGYTAG 291

Query: 321 PN------DVTQNPTRAGFELNWNFGNGFDRQLRLKSALAEVANQEAKLEGVKLNLFELT 374
            +      +   + +  G ELN    +G       + A A  +    +L+  +  +   T
Sbjct: 292 SSQSISELNQRNHYSSIGLELNIPLYSGGSTSALSRQASANSSKALDELDATRQEVISNT 351

Query: 375 SASWARTVSGRERERQLMEAVSTSGQAFRGRRR-LMEFGRETLPKVLDAQLDYYTLLFDY 433
           +  +    SG  R + L +AV+++ ++    R+   E G  T   VL+A+   Y    D 
Sbjct: 352 TREYRGVQSGALRIQALEKAVASNERSLTSTRKGFKEGGTSTNSDVLNAEELLYDARHDL 411

Query: 434 VDGVFDLRITELRLARTTGELRIDPV 459
            +   +  ++ LRLA + G L  D +
Sbjct: 412 FEAKLNYLMSRLRLASSVGSLGDDDI 437



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 3/183 (1%)

Query: 66  VKQALIALSQDYPEVQTAQAAANTSSYGVDAAKQARYPRFNF--GTTTGNYNSGAAGART 123
           +++ L+    D P +   + +   +   V+ A+   YP  +F  G T G+  S +   + 
Sbjct: 243 LQEWLVKAQADSPLIHARRHSYALAEEEVNRARSGHYPTLDFVAGYTAGSSQSISELNQR 302

Query: 124 QSYTVLTAQARMSLLDGGAMSAAQRAAEAGNQADDEAVVTTSQKVVLDALTAYLQVQRYD 183
             Y+ +  +  + L  GG+ SA  R A A +    + +  T Q+V+ +    Y  VQ   
Sbjct: 303 NHYSSIGLELNIPLYSGGSTSALSRQASANSSKALDELDATRQEVISNTTREYRGVQSGA 362

Query: 184 LKKQIAHKATEVVAELSKAEARRVALGVTGDNDLNMAASRRALVAARESDFEAQRDEAMA 243
           L+ Q   KA         +  +    G T  N  ++  +   L  AR   FEA+ +  M+
Sbjct: 363 LRIQALEKAVASNERSLTSTRKGFKEGGTSTNS-DVLNAEELLYDARHDLFEAKLNYLMS 421

Query: 244 KFR 246
           + R
Sbjct: 422 RLR 424