Pairwise Alignments

Query, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  186 bits (471), Expect = 1e-51
 Identities = 131/396 (33%), Positives = 200/396 (50%), Gaps = 48/396 (12%)

Query: 45  FPMETVVVAPGRVIPSDRVKSIQHLEGGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLE 104
           F +  V    G+VIPS R + IQ  EGGIV+ + V EGD V+ GQ L ++D   +  ++ 
Sbjct: 43  FEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVG 102

Query: 105 ELTARYAATQATRVRLMAESRGQPLRRESFAKDIDEGVFEGETGAYQARALEQRGVMAGA 164
           E  A+Y A +A++ RL AE  G+PL      +D  + + + ET  YQ R           
Sbjct: 103 ESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPD-LIDAETALYQTRR---------- 151

Query: 165 VSGLEQARSKKLEQQAKVKGLGDRLELMQKELEISEQLLSEKLVGQVEVLEKRRQAESVR 224
             GLEQ           + G+ D L+L++ EL+I+E L       +VEV+   RQ    R
Sbjct: 152 -RGLEQT----------LAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQ----R 196

Query: 225 SELAVARQGVVSADAAITEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQR 284
           SEL                 + K  EA   Y  RA +ELA    +  +LSE +       
Sbjct: 197 SEL-----------------ELKANEARSDYLVRAREELAKASAEADALSEVIRGRSDSL 239

Query: 285 SRTVVKAPSDGIVKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQT 344
           +R  +++P  GIVK +  ++ G VV+PG  ++++VP ++ +++E R+ P D  FI   Q 
Sbjct: 240 TRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQA 299

Query: 345 ARVKITAYDYLRYGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSHVGRDENR--- 401
           A+VKI+AYDY  YG +DGKV  ++ D  +D  +     YYR+ I   Q  +     +   
Sbjct: 300 AKVKISAYDYSVYGGLDGKVVGISPDTLQD-EVKPEIYYYRVFIRTEQDSLQNKAGKRFA 358

Query: 402 ITAGMESEVDLRVGTDPFIWYILRPVLKLRREAFRE 437
           I  GM + VD+R G    + Y+++P L   +EA RE
Sbjct: 359 IVPGMIATVDIRTGEKTILDYLIKP-LNRAKEALRE 393