Pairwise Alignments

Query, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  218 bits (555), Expect = 3e-61
 Identities = 134/394 (34%), Positives = 204/394 (51%), Gaps = 4/394 (1%)

Query: 46  PMETVVVAPGRVIPSDRVKSIQHLEGGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLEE 105
           P++ V    G+ IPS +V+ IQ+LEGGIV+ +  KEG  V+ GQPL+ +D      N+ E
Sbjct: 66  PIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQPLLRLDETRFASNVGE 125

Query: 106 LTARYAATQATRVRLMAESRGQPLRRESFAKDIDEGVFEGETGAYQARALEQRGVMAGAV 165
             A   A      RL AE   +PL  +   +         E   YQ+R  + +  + G  
Sbjct: 126 TEADRLAMALRVERLSAEVEDRPLIIDEKLRKAAPNQAASEESLYQSRRQQLQDEIGGLQ 185

Query: 166 SGLEQARSKKLEQQAKVKGLGDRLELMQKELEISEQLLSEKLVGQVEVLEKRRQAESVRS 225
             L Q + +  E  +K     + LEL++KE+ +SE L++   + QVEVL  RR     R 
Sbjct: 186 QQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRG 245

Query: 226 ELAVARQGVVSADAAITEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQRS 285
           +L      +  A+AAI E Q+K+ E  G++R  A  +L     +    +        +  
Sbjct: 246 QLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVH 305

Query: 286 RTVVKAPSDGIVKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQTA 345
           RT+V +P  GIVK L  ++ G V++PG  I+EVVP +D +++EA++ P D  F+  GQ A
Sbjct: 306 RTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEA 365

Query: 346 RVKITAYDYLRYGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSHVGRDEN--RIT 403
            VK TAYDY  YG +  K++ + AD   D        YY + +   +SH+G DE    I 
Sbjct: 366 TVKFTAYDYTIYGGLKAKLEQIGADTITDE--DKKTTYYLIKLRTDRSHLGTDEKPLLII 423

Query: 404 AGMESEVDLRVGTDPFIWYILRPVLKLRREAFRE 437
            GM + VD+  G    + Y+L+P++K R EA RE
Sbjct: 424 PGMVATVDIMTGKKTIMSYLLKPIMKARSEALRE 457